Gene EcolC_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1482 
Symbol 
ID6067167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1635879 
End bp1636820 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content46% 
IMG OID641600902 
Producthypothetical protein 
Protein accessionYP_001724472 
Protein GI170019518 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0391896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000306075 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGAAA AGGATTATGT CGTAATTATA GGTTCGGCGA ATATTGATGT CGCCGGATAT 
TCACATGAAT CATTAAATTA TGCGGATTCA AATCCAGGTA AAATAAAATT TACGCCTGGT
GGAGTAGGGC GCAATATTGC ACAAAACCTG GCGTTGCTGG GTAACAAAGC CTGGCTACTG
AGCGCAGTAG GCAGTGATTT TTATGGTCAA TCGCTGCTAA CGCAAACCAA TCAATCTGGC
GTTTATGTCG ATAAATGCCT GATTGTGCCG GGAGAAAATA CGTCTAGTTA TTTATCATTA
CTCGATAATA CCGGTGAAAT GCTGGTTGCT ATAAATGACA TGAATATTAG CAACGCTATT
ACAGCTGAAT ATCTCGCACA GCACCGTGAA TTTATTCAGA GGGCAAAGGT CATTGTTGCG
GACTGTAATA TCAGTGAAGA GGCACTGGCA TGGATTCTGG ATAATGCCGC CAACGTACCC
GTATTTGTCG ATCCGGTTTC CGCATGGAAA TGTGTCAAAG TGCGCGACCG TCTAAATCAG
ATCCACACTC TGAAGCCAAA CCGCCTTGAA GCGGAAACCC TGAGTGGGAT TGCGCTGTCA
GGGCGTGACG ATGTGGCAAA AGTTGCTGCC TGGTTCCATC AACATGGCCT GAACCGACTG
GTATTGAGCA TGGGCGGCGA CGGCGTTTAT TACAGCGATA TCAGAGGTGA AAATGGCTGG
TCTGCGCCGA TCAAAACCAA TGTTATTAAT GTTACCGGAG CGGGCGATGC CATGATGGCG
GGACTTGCTT CGTGTTGGGT AGACGGAATG CCGTTTGCCG AATCTGTTCG TTTCGCACAG
GGATGTTCGT CAATGGCGCT CTCCTGTGAA TACACCAATA ACCCCGATTT ATCGATTGCC
AACGTTATAT CGTTAGTGGA GAACGCAGAA TGTCTAAATT AA
 
Protein sequence
MREKDYVVII GSANIDVAGY SHESLNYADS NPGKIKFTPG GVGRNIAQNL ALLGNKAWLL 
SAVGSDFYGQ SLLTQTNQSG VYVDKCLIVP GENTSSYLSL LDNTGEMLVA INDMNISNAI
TAEYLAQHRE FIQRAKVIVA DCNISEEALA WILDNAANVP VFVDPVSAWK CVKVRDRLNQ
IHTLKPNRLE AETLSGIALS GRDDVAKVAA WFHQHGLNRL VLSMGGDGVY YSDIRGENGW
SAPIKTNVIN VTGAGDAMMA GLASCWVDGM PFAESVRFAQ GCSSMALSCE YTNNPDLSIA
NVISLVENAE CLN