| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1479 |
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| Symbol | |
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| ID | 6067187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1631679 |
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| End bp | 1632809 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641600899 |
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| Product | bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein |
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| Protein accession | YP_001724469 |
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| Protein GI | 170019515 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000150472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000341922 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCCAGT TATCCGTACA GGACATCCAT CCGGGCGAAA AGGCCGGAGA CAAAGAAGAG
GCGATTCGCC AGGTCGCTGC GGCGCTGGTG CATGCCGGTA ATGTAGCAGA AGGCTACGTC
AATGGCATGC TGGCGCGCGA GCAGCAAACC TCAACGTTCC TCGGCAATGG TATTGCTATT
CCACACGGCA CCACCGACAC CCGCGATCAG GTGCTGAAAA CGGGCGTTCA GGTATTTCAG
TTCCCGGAAG GCGTCACCTG GGGTGACGGT CAGGTAGCGT ACGTGGCGAT CGGTATTGCT
GCCAGCTCGG ATGAACATCT GGGCCTGCTA CGCCAGCTGA CCCACGTACT GAGCGATGAT
TCCGTTGCTG AACAACTGAA GTCAGCAACA ACAGCAGAAG AACTTCGCGC ATTGCTGATG
GGCGAAAAGC AGAGTGAGCA GCTGAAGCTC GACAACGAAA TGCTGACGCT GGATATCGTC
GCCAGCGATC TGCTGACTCT TCAGGCGCTG AACGCTGCGC GTCTGAAAGA GGCGGGGGCA
GTTGACGCCA CTTTCGTCAC CAAAGCCATC AATGAACAAC CGCTGAACCT CGGACAGGGT
ATCTGGCTGA GCGATAGCGC CGAAGGCAAT CTGCGTAGCG CGATTGCGGT AAGCCGTGCG
GCAAATGCTT TTGATGTGGA CGGCGAAACG GCAGCCATGC TGGTGAGTGT GGCGATGAAT
GACGATCAGC CCCTCGCGGT TCTTAAGCGT CTCGCTGATT TGTTGCTCGA CAATAAAGCT
GACCGCTTGC TGAAAGCGGA TGCGGCAACG TTGCTGGCGC TGCTGACCAG CGATGATGCG
CCGACCGACG ACGTGTTAAG CGCGGAGTTT GTGGTGCGCA ATGAACACGG CCTGCATGCT
CGTCCAGGTA CCATGCTGGT CAATACCATT AAACAATTTA ACAGTGATAT TACCGTGACA
AACCTTGATG GCACCGGCAA ACCGGCAAAC GGACGTAGTC TGATGAAAGT TGTGGCACTT
GGCGTTAAGA AAGGTCATCG CCTACGCTTT ACCGCCCAGG GTGCAGATGC TGAACAGGCG
CTGAAAGCAA TCGGCGACGC TATCGCTGCT GGTCTTGGGG AGGGCGCATA A
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| Protein sequence | MFQLSVQDIH PGEKAGDKEE AIRQVAAALV HAGNVAEGYV NGMLAREQQT STFLGNGIAI
PHGTTDTRDQ VLKTGVQVFQ FPEGVTWGDG QVAYVAIGIA ASSDEHLGLL RQLTHVLSDD
SVAEQLKSAT TAEELRALLM GEKQSEQLKL DNEMLTLDIV ASDLLTLQAL NAARLKEAGA
VDATFVTKAI NEQPLNLGQG IWLSDSAEGN LRSAIAVSRA ANAFDVDGET AAMLVSVAMN
DDQPLAVLKR LADLLLDNKA DRLLKADAAT LLALLTSDDA PTDDVLSAEF VVRNEHGLHA
RPGTMLVNTI KQFNSDITVT NLDGTGKPAN GRSLMKVVAL GVKKGHRLRF TAQGADAEQA
LKAIGDAIAA GLGEGA
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