| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1470 |
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| Symbol | |
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| ID | 6067227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 1620996 |
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| End bp | 1622810 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641600890 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001724460 |
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| Protein GI | 170019506 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000141163 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0234366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTGC GCATACTGCT GCTGTTTATC GCCCTGTTCA CCTTCGGTGC GCAGGCGCAG
GCTATCAAGG AAAGCTATGC CTTTGCCGTG CTGGGCGAAC CCCGGTACGC ATTTAATTTC
AACCATTTTG ATTATGTGAA CCCCGCCGCG CCAAAAGGTG GGCAGATAAC GTTGTCAGCC
CTCGGCACCT TCGATAATTT CAACCGCTAT GCACTGCGCG GCAACCCGGG CGCACGCACC
GAGCAGTTGT ACGACACGCT ATTTACGACT TCCGATGACG AACCAGGCAG TTATTACCCG
CTGATTGCTG AAAGTGCACG CTATGCTGAC GATTATTCCT GGGTGGAGGT CGCTATTAAT
CCGCGCGCCC GTTTTCATGA TGGTTCGCCC ATTACTGCCC GCGATGTAGA GTTTACTTTT
CAAAAATTTA TGACCGAAGG CGTGCCGCAA TTTCGTCTGG TCTACAAAGG CACCACCGTC
AAAGCCATTG CACCGTTAAC CGTGCGCATT GAGTTAGCTA AACCCGGCAA AGAAGATATG
CTGAGTCTGT TTTCGCTGCC GGTATTTCCA GAAAAGTACT GGAAGGATCA CAAACTTAGC
GACCCGCTCG CCACGCCTCC GCTTGCCAGT GGTCCGTACC GCGTTACGTC CTGGAAAATG
GGGCAAAATA TTGTCTATTC CCGTGTGAAA GATTACTGGG CAGCAAACTT ACCGGTAAAC
CGTGGACGCT GGAATTTCGA CACCATTCGC TACGATTATT ACCTCGATGA TAATGTCGCC
TTTGAAGCGT TTAAAGCAGG TGCCTTTGAT TTGCGTATGG AAAACGACGC CAAAAACTGG
GCCACGCGTT ATACCGGTAA AAATTTCGAT AAAAAATACA TCATCAAAGA TGAGCAAAAG
AACGAATCAG CCCAGGATAC GCGTTGGCTG GCGTTTAATA TCCAACGTCC GGTATTCAGC
GATCGCCGGG TCCGGGAAGC TATCACTCTC GCCTTTGACT TTGAATGGAT GAACAAGGCG
TTGTTTTACA ATGCCTGGAG TCGCACGAAC AGTTATTTTC AGAATACCGA ATACGCGGCC
AGAAATTACC CCGACGCCGC GGAGCTGGTG CTTCTGGCAC CAATGAAAAA AGATCTACCG
TCAGAAGTCT TCACACAAAT CTACCAGCCG CCGGTATCCA AAGGCGATGG CTACGATCGT
GACAACCTGT TAAAAGCCGA CAAACTTCTC AACGAAGCGG GCTGGGTGCT GAAGGGTCAG
CAACGCGTTA ATGCCACAAC GGGTCAGCCA CTCAGCTTTG AATTATTGCT TCCCGCAAGC
AGCAATAGTC AGTGGGTATT GCCGTTCCAG CACAGCCTGC AACGGCTGGG TATCAACATG
GACATTCGCA AGGTGGATAA CTCGCAAATC ACTAACCGCA TGCGCAGTCG CGACTATGAC
ATGATGCCGC GCGTATGGCG GGCGATGCCG TGGCCCAGTT CCGATTTACA GATTTCCTGG
TCATCGGAAT ATATCAATTC CACTTATAAT GCCCCCGGCG TGCAAAGCCC GGTTATCGAC
TCGCTGATCA ACCAAATTAT TGCCGCGCAG GGAAATAAAG AAAAATTACT GCCGTTGGGG
CGAGCACTGG ATCGCGTATT AACGTGGAAT TATTACATGC TGCCAATGTG GTACATGGCG
GAAGACCGTC TCGCCTGGTG GGATAAATTC TCCCAACCCG CTGTACGCCC TGTTTACAGC
CTGGGTATCG ATACCTGGTG GTATGACGTT AATAAAGCGG CCAAACTGCC GTCAGCCAGA
CAACAGGGAG AGTAG
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| Protein sequence | MIVRILLLFI ALFTFGAQAQ AIKESYAFAV LGEPRYAFNF NHFDYVNPAA PKGGQITLSA
LGTFDNFNRY ALRGNPGART EQLYDTLFTT SDDEPGSYYP LIAESARYAD DYSWVEVAIN
PRARFHDGSP ITARDVEFTF QKFMTEGVPQ FRLVYKGTTV KAIAPLTVRI ELAKPGKEDM
LSLFSLPVFP EKYWKDHKLS DPLATPPLAS GPYRVTSWKM GQNIVYSRVK DYWAANLPVN
RGRWNFDTIR YDYYLDDNVA FEAFKAGAFD LRMENDAKNW ATRYTGKNFD KKYIIKDEQK
NESAQDTRWL AFNIQRPVFS DRRVREAITL AFDFEWMNKA LFYNAWSRTN SYFQNTEYAA
RNYPDAAELV LLAPMKKDLP SEVFTQIYQP PVSKGDGYDR DNLLKADKLL NEAGWVLKGQ
QRVNATTGQP LSFELLLPAS SNSQWVLPFQ HSLQRLGINM DIRKVDNSQI TNRMRSRDYD
MMPRVWRAMP WPSSDLQISW SSEYINSTYN APGVQSPVID SLINQIIAAQ GNKEKLLPLG
RALDRVLTWN YYMLPMWYMA EDRLAWWDKF SQPAVRPVYS LGIDTWWYDV NKAAKLPSAR
QQGE
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