| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1454 |
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| Symbol | |
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| ID | 6067355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1601645 |
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| End bp | 1603588 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641600873 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001724444 |
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| Protein GI | 170019490 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.494014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCGG AAATTGGTAA CGGGCTGCTG TGTCTGGCGC TAGGAATTGC GCTGCTGCTG
TCCGTGTATC CGCTATGGGG CGTAGCGCGC GGAGATGCGC GCATGATGGC GTCTTCCCGC
TTGTTTGCCT GGCTGCTGTT TATGTCTGTG GCTGGCGCAT TTCTGGTACT GGTCAATGCC
TTCGTGGTCA ACGACTTCAC CGTCACCTAT GTTGCCAGCA ACTCCAATAC CCAGCTTCCG
GTGTGGTATC GCGTGGCGGC TACCTGGGGC GCGCATGAAG GCTCGCTCCT GCTGTGGGTG
CTGCTGATGA GCGGCTGGAC CTTTGCGGTA GCGATTTTTA GTCAGCGTAT TCCGCTGGAT
ATTGTGGCCC GCGTACTGGC GATAATGGGG ATGGTCAGCG TCGGCTTTTT GCTGTTCATT
CTCTTTACCT CTAACCCGTT CTCACGCACG TTGCCGAACT TCCCGATTGA AGGGCGCGAT
CTTAACCCGC TGTTACAGGA TCCGGGGCTG ATCTTCCATC CGCCTCTGCT CTATATGGGG
TACGTGGGGT TCTCGGTGGC GTTTGCTTTT GCCATTGCTT CTTTGCTGAG CGGGCGTCTG
GACAGCACTT ATGCGCGTTT TACTCGCCCG TGGACGCTGG CGGCGTGGAT TTTCCTGACG
CTCGGCATTG TGCTCGGTTC CGCATGGGCC TATTACGAAC TCGGCTGGGG CGGCTGGTGG
TTCTGGGATC CGGTAGAAAA CGCCTCGTTT ATGCCGTGGC TGGTGGGGAC TGCGCTGATG
CACTCACTGG CGGTCACTGA ACAACGCGCC AGTTTCAAAG CGTGGACATT ACTGCTGGCA
ATCAGTGCCT TCTCGTTGTG TCTGCTGGGG ACCTTCCTCG TGCGTTCCGG CGTGCTGGTA
TCGGTACACG CGTTTGCGTC TGATCCGGCG CGCGGTATGT TTATCCTCGC CTTTATGGTG
CTGGTGATTG GCGGTTCGCT GCTGCTGTTT GCCGCGCGTG GACACAAAGT TCGCTCACGC
GTAAACAATG CGCTGTGGTC GCGGGAATCT TTGCTGTTAG CGAACAATGT TTTGCTGGTC
GCTGCGATGC TGGTGGTGTT GCTGGGGACG CTGCTGCCGT TGGTGCATAA GCAACTGGGA
CTGGGCAGTA TTTCGATTGG CGAACCGTTC TTCAACACCA TGTTTACCTG GCTGATGGTG
CCGTTTGCGC TACTGCTTGG TGTCGGTCCT CTGGTGCGCT GGGGGCGGGA TCGCCCGCGT
AAGATCCGCA ATTTATTGAT TATCGCCTTC ATCTCTACGC TGGTGCTGTC GCTGCTGTTG
CCGTGGCTGT TCGAAAGCAA AGTTGTGGCG ATGACGGTGC TCGGCCTGGC AATGGCCTGC
TCGATTGCGG TGCTGGCAAT TGCGGAAGCT GCGCTACGTA TTTCACGCGG CACGAAAACC
ACCTTCAGTT ATTGGGGGAT GGTGGCGGCT CACCTTGGGC TGGCAGTGAC AATTGTTGGC
ATTGCCTTTA GCCAGAACTA TAGCGTTGAG CGTGATGTGC GCATGAAGTC CGGCGATAGC
GTCGATATTC ATGAATATCG CTTCACCTTC CGTGATGTCA AAGAGGTGAC TGGCCCGAAC
TGGCGTGGCG GTGTGGCGAC TATCGGCGTA ACGCGCGATG GCAAGCCGGA AACGGTGCTG
TATGCGGAAA AACGTTATTA CAACACTGCC GGGTCGATGA TGACCGAAGC GGCAATTGAC
GGCGGCATCA CGCGTGACCT GTACGCCGCG CTCGGTGAAG AGCTGGAAAA CGGCGCGTGG
GCCGTGCGTC TTTACTACAA ACCATTTGTT CGCTGGATTT GGGCGGGCGG GCTGATGATG
GCGTTGGGCG GACTGCTGTG TCTGTTTGAT CCTCGCTATC GTAAGCGCGT GAGTCCGCAA
AAAACTGCGC CGGAGGCCGT ATGA
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| Protein sequence | MMPEIGNGLL CLALGIALLL SVYPLWGVAR GDARMMASSR LFAWLLFMSV AGAFLVLVNA
FVVNDFTVTY VASNSNTQLP VWYRVAATWG AHEGSLLLWV LLMSGWTFAV AIFSQRIPLD
IVARVLAIMG MVSVGFLLFI LFTSNPFSRT LPNFPIEGRD LNPLLQDPGL IFHPPLLYMG
YVGFSVAFAF AIASLLSGRL DSTYARFTRP WTLAAWIFLT LGIVLGSAWA YYELGWGGWW
FWDPVENASF MPWLVGTALM HSLAVTEQRA SFKAWTLLLA ISAFSLCLLG TFLVRSGVLV
SVHAFASDPA RGMFILAFMV LVIGGSLLLF AARGHKVRSR VNNALWSRES LLLANNVLLV
AAMLVVLLGT LLPLVHKQLG LGSISIGEPF FNTMFTWLMV PFALLLGVGP LVRWGRDRPR
KIRNLLIIAF ISTLVLSLLL PWLFESKVVA MTVLGLAMAC SIAVLAIAEA ALRISRGTKT
TFSYWGMVAA HLGLAVTIVG IAFSQNYSVE RDVRMKSGDS VDIHEYRFTF RDVKEVTGPN
WRGGVATIGV TRDGKPETVL YAEKRYYNTA GSMMTEAAID GGITRDLYAA LGEELENGAW
AVRLYYKPFV RWIWAGGLMM ALGGLLCLFD PRYRKRVSPQ KTAPEAV
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