| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1427 |
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| Symbol | |
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| ID | 6067684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 1570442 |
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| End bp | 1571764 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641600846 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_001724417 |
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| Protein GI | 170019463 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000516519 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGGTC GCATATCGCG TTTTATGACG CGTTTTGTCA GCCGGTGGCT TCCCGATCCA
CTGATCTTTG CCATGTTGCT GACATTGCTA ACATTCGTGA TCGCGCTTTG GTTAACACCA
CAAACGCCGA TCAGCATGGT GAAAATGTGG GGTGACGGTT TCTGGAACTT GCTGGCGTTT
GGTATGCAGA TGGCGCTTAT CATCGTTACC GGTCATGCCC TTGCCAGCTC TGCTCCGGTG
AAAAGTTTGC TGCGTACTGC CGCCTCCGCC GCAAAGACGC CCGTACAGGG CGTCATGCTG
GTCACTTTCT TCGGTTCAGT CGCTTGTGTC ATCAACTGGG GATTTGGTTT GGTTGTCGGC
GCAATGTTTG CCCGTGAAGT CGCCCGGCGA GTCCCCGGTT CTGATTATCC GTTGCTCATT
GCCTGCGCCT ACATTGGTTT TCTCACCTGG GGTGGCGGCT TCTCTGGATC AATGCCTCTG
TTGGCTGCAA CACCGGGCAA CCCGGTTGAG CATATCGCCG GGCTGATCCC GGTGGGCGAT
ACTCTGTTCA GTGGTTTTAA CATTTTCATC ACTGTGGCGT TGATTGTGGT GATGCCATTT
ATCACCCGCA TGATGATGCC AAAACCGTCT GACGTGGTGA GTATCGATCC AAAACTACTC
ATGGAAGAGG CTGATTTTCA AAAGCAGCTA CCGAAAGATG CCCCACCATC CGAGCGACTG
GAAGAAAGCC GCATTCTGAC GTTGATCATC GGCGCACTCG GTATCGCTTA CCTTGCGATG
TACTTCAGCG AACATGGCTT CAACATCACC ATCAATACCG TCAACCTGAT GTTTATGATT
GCGGGTCTGC TGCTACATAA AACGCCAATG GCTTATATGC GTGCTATCAG CGCGGCAGCA
CGCAGTACTG CCGGTATTCT GGTGCAATTC CCCTTCTACG CTGGGATCCA ACTGATGATG
GAGCATTCCG GTCTGGGCGG ACTCATTACC GAATTCTTCA TCAATGTTGC GAACAAAGAC
ACCTTCCCGG TAATGACCTT TTTTAGTTCT GCACTGATTA ACTTCGCCGT TCCGTCTGGC
GGCGGTCACT GGGTTATTCA GGGACCTTTC GTGATACCCG CAGCCCAGGC GCTGGGCGCT
GATCTCGGTA AATCGGTAAT GGCGATCGCC TACGGCGAGC AATGGATGAA CATGGCACAA
CCATTCTGGG CGCTGCCAGC ACTGGCAATC GCCGGACTCG GTGTCCGCGA CATCATGGGC
TACTGCATCA CTGCCCTGCT CTTCTCCGGT GTCATTTTCG TCATTGGTTT AACGCTGTTC
TGA
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| Protein sequence | MIGRISRFMT RFVSRWLPDP LIFAMLLTLL TFVIALWLTP QTPISMVKMW GDGFWNLLAF
GMQMALIIVT GHALASSAPV KSLLRTAASA AKTPVQGVML VTFFGSVACV INWGFGLVVG
AMFAREVARR VPGSDYPLLI ACAYIGFLTW GGGFSGSMPL LAATPGNPVE HIAGLIPVGD
TLFSGFNIFI TVALIVVMPF ITRMMMPKPS DVVSIDPKLL MEEADFQKQL PKDAPPSERL
EESRILTLII GALGIAYLAM YFSEHGFNIT INTVNLMFMI AGLLLHKTPM AYMRAISAAA
RSTAGILVQF PFYAGIQLMM EHSGLGGLIT EFFINVANKD TFPVMTFFSS ALINFAVPSG
GGHWVIQGPF VIPAAQALGA DLGKSVMAIA YGEQWMNMAQ PFWALPALAI AGLGVRDIMG
YCITALLFSG VIFVIGLTLF
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