| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1402 |
|---|
| Symbol | |
|---|
| ID | 6067871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1535106 |
|---|
| End bp | 1536311 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641600822 |
|---|
| Product | mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_001724393 |
|---|
| Protein GI | 170019439 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.25889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTAC CAAAAATTAA ACAGGTTCGC GCCTGGTTTA CTGGCGGTGC GACAGCAGAA
AAAGGCGCTG GCGGCGGTGA TTATCACGAC CAGGGGGCGA ATCACTGGAT AGACGATCAT
ATTGCCACCC CGATGAGTAA ATACCGCGAT TACGAGCAGT CACGCCAGTC ATTTGGCATT
AACGTTCTTG GCACGTTGGT TGTTGAAGTC GAAGCAGAAA ACGGCCAGAC CGGATTCGCC
GTTTCGACAG CCGGTGAAAT GGGCTGTTTT ATTGTCGAAA AACATCTTAA CCGTTTCATT
GAGGGTAAAT GTGTCAGTGA TATCAAACTG ATCCACGATC AAATGCTCAG TGCCACCCTG
TATTACTCCG GCTCTGGTGG CCTGGTGATG AATACGATTT CTTGTGTCGA TCTGGCTCTG
TGGGATCTGT TCGGCAAAGT GGTCGGGCTT CCGGTTTATA AACTTTTAGG CGGCGCTGTT
CGTGATGAGA TTCAGTTCTA CGCCACAGGT GCGCGTCCGG ATCTGGCAAA AGAGATGGGC
TTTATCGGTG GCAAAATGCC GACGCACTGG GGGCCACATG ATGGCGATGC GGGGATCCGC
AAAGATGCCG CTATGGTCGC GGATATGCGT GAAAAATGCG GTGAGGATTT CTGGTTAATG
CTCGACTGCT GGATGAGTCA GGACGTGAAC TATGCGACCA AACTGGCCCA CGCTTGCGCG
CCCTATAACC TGAAATGGAT CGAAGAGTGC CTGCCGCCAC AGCAGTATGA AAGTTATCGC
GAACTGAAAC GCAACGCGCC AGTCGGAATG ATGGTCACCA GCGGTGAGCA CCACGGCACA
CTGCAATCTT TTCGTACGCT TTCAGAAACC GGTATCGACA TTATGCAGCC GGATGTTGGC
TGGTGCGGTG GTTTAACCAC GCTGGTGGAA ATTGCCGCAA TCGCCAAATC CAGGGGGCAA
CTGGTGGTGC CGCACGGTTC GTCTGTTTAC TCTCACCATG CGGTGATCAC CTTCACCAAT
ACGCCATTCA GCGAATTCCT GATGACCAGC CCGGATTGTT CAACGATGCG TCCGCAGTTT
GACCCGATTC TGCTCAATGA GCCGGTTCCG GTGAATGGTC GTATTCATAA ATCAGTGCTT
GATAAACCCG GTTTTGGCGT CGAACTCAAT CGTGACTGCA ATTTGAAACG CCCCTACAGC
CACTAA
|
|---|
| Protein sequence | MTLPKIKQVR AWFTGGATAE KGAGGGDYHD QGANHWIDDH IATPMSKYRD YEQSRQSFGI
NVLGTLVVEV EAENGQTGFA VSTAGEMGCF IVEKHLNRFI EGKCVSDIKL IHDQMLSATL
YYSGSGGLVM NTISCVDLAL WDLFGKVVGL PVYKLLGGAV RDEIQFYATG ARPDLAKEMG
FIGGKMPTHW GPHDGDAGIR KDAAMVADMR EKCGEDFWLM LDCWMSQDVN YATKLAHACA
PYNLKWIEEC LPPQQYESYR ELKRNAPVGM MVTSGEHHGT LQSFRTLSET GIDIMQPDVG
WCGGLTTLVE IAAIAKSRGQ LVVPHGSSVY SHHAVITFTN TPFSEFLMTS PDCSTMRPQF
DPILLNEPVP VNGRIHKSVL DKPGFGVELN RDCNLKRPYS H
|
|---|
| |