Gene EcolC_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1398 
Symbol 
ID6067905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1531541 
End bp1531966 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content48% 
IMG OID641600818 
ProductNUDIX hydrolase 
Protein accessionYP_001724389 
Protein GI170019435 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.708086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACAAC GGACTATTGT ATGCCCTTTG ATTCAAAATG ATGGTGCTTA TTTGCTGTGT 
AAAATGGCCG ACGATCGCGG CGTTTTCCCC GGTCAATGGG CGATTTCGGG TGGCGGCGTG
GAGCCTGGCG AACGAATTGA AGAGGCACTA CGCCGCGAAA TTCGCGAAGA ACTGGGAGAA
CAGCTGCTTT TGACAGAAAT CACGCCGTGG ACCTTCAGCG ATGATATTCG CACCAAGACG
TATGCAGATG GTCGCAAGGA AGAGATTTAT ATGATTTACC TGATTTTTGA CTGCGTTTCT
GCCAACCGAG AAGTGAAAAT AAACGAAGAG TTTCAGGACT ACGCGTGGGT AAAACCTGAA
GATCTGGTGC ATTATGATTT GAATGTCGCC ACCCGAAAAA CGTTACGTTT GAAAGGTCTT
CTGTAA
 
Protein sequence
MRQRTIVCPL IQNDGAYLLC KMADDRGVFP GQWAISGGGV EPGERIEEAL RREIREELGE 
QLLLTEITPW TFSDDIRTKT YADGRKEEIY MIYLIFDCVS ANREVKINEE FQDYAWVKPE
DLVHYDLNVA TRKTLRLKGL L