Gene EcolC_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1388 
Symbol 
ID6067985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1521517 
End bp1522872 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content56% 
IMG OID641600808 
ProductO-succinylbenzoic acid--CoA ligase 
Protein accessionYP_001724379 
Protein GI170019425 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR01923] O-succinylbenzoate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCT CTGACTGGCC GTGGCGTCAC TGGCGGCAAG TGCGGGGAGA AACCATCGCC 
TTACGTCTTA ATGACGAGCA ACTCAACTGG CGCGAGCTTT GTGCTCGCGT CGATGAATTA
GCCTCCGGAT TTGCGGTGCA GGGGGTGGTT GAGGGCAGCG GCGTGATGTT GCGGGCGTGG
AATACGCCGC AAACGCTGCT CGCCTGGCTG GCGTTACTGC AATGCGGGGC GCGGGTGTTG
CCCGTGAACC CTCAGCTGCC GCAACCGTTG CTTGAAGAAT TGCTGCCCAA TCTGACGCTG
CAATTTGCGC TGGTGCCGGA TGGGGAAAAC ACGTTTCCGG CATTAACGTC GCTGCACATT
CAGCGGGTTG AAGGCGCACA TGCCGCTACG TGGCAGCCGA CGCGTCTGTG CTCAATGACG
TTGACCTCGG GTTCTACCGG GTTGCCGAAA GCCGCTGTCC ATACTTATCA GGCCCATCTT
GCCAGTGCCG AAGGGGTGTT ATCGTTGATT CCGTTTGGCG ATCACGATGA CTGGTTGCTC
TCTTTACCGC TGTTTCACGT CTCCGGTCAG GGAATTATGT GGCGCTGGTT ATACGCTGGT
GCGCGGGTGA CGGTGCGTGA TAAACAGCCA TTGGAGCAAA TGCTGGCAGG CTGTACTCAC
GCTTCACTGG TGCCAACACA ACTCTGGCGT TTGCTGGTTA ACCGCAGTTC CGTTTCCCTG
AAAGCGGTGT TACTTGGCGG CGCGGCTATC CCGGTCGAGT TGACGGAACA GGCGCGCGAG
CAGGGGATTC GTTGCTTTTG CGGCTATGGT CTGACCGAGT TTGCCTCCAC GGTGTGTGCG
AAAGAAGCCG ACGGCCTGGC AGACGTTGGT TCGCCGCTGC CGGGTCGGGA AGTGAAAATC
GTTAATAATG AAGTGTGGCT GCGGGCTGCC AGTATGGCAG AAGGTTACTG GCGTAACGGG
CAACTGGTTT CACTGGTTAA TGACGAAGGC TGGTACGCTA CGCGCGATCG CGGTGAGATG
CATAATGGCA AGCTGACCAT TGTCGGACGT TTAGACAATC TATTCTTCAG TGGCGGAGAG
GGTATTCAGC CGGAAGAAGT CGAGCGCGTA ATTGCTGCAC ATCCTGCGGT TTTGCAGGTG
TTTATCGTCC CCGTTGCCGA CAAGGAGTTT GGTCATCGAC CGGTGGCGGT GATGGAGTAT
GACCACGAGA GCGTTGATCT TAGTGAATGG GTGAAAGATA AGCTGGCCCG TTTTCAGCAA
CCGGTGCGTT GGTTAACGTT GCCGCCTGAA CTGAAAAACG GCGGTATTAA AATTTCACGT
CAGGCGCTAA AAGAGTGGGT GCAACGTCAG CAATAA
 
Protein sequence
MIFSDWPWRH WRQVRGETIA LRLNDEQLNW RELCARVDEL ASGFAVQGVV EGSGVMLRAW 
NTPQTLLAWL ALLQCGARVL PVNPQLPQPL LEELLPNLTL QFALVPDGEN TFPALTSLHI
QRVEGAHAAT WQPTRLCSMT LTSGSTGLPK AAVHTYQAHL ASAEGVLSLI PFGDHDDWLL
SLPLFHVSGQ GIMWRWLYAG ARVTVRDKQP LEQMLAGCTH ASLVPTQLWR LLVNRSSVSL
KAVLLGGAAI PVELTEQARE QGIRCFCGYG LTEFASTVCA KEADGLADVG SPLPGREVKI
VNNEVWLRAA SMAEGYWRNG QLVSLVNDEG WYATRDRGEM HNGKLTIVGR LDNLFFSGGE
GIQPEEVERV IAAHPAVLQV FIVPVADKEF GHRPVAVMEY DHESVDLSEW VKDKLARFQQ
PVRWLTLPPE LKNGGIKISR QALKEWVQRQ Q