Gene EcolC_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1376 
Symbol 
ID6068078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1509419 
End bp1510876 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content57% 
IMG OID641600798 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_001724369 
Protein GI170019415 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.94237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAA CTCCACAAAA CCTGATCGCA CTGCTACCGT TGCTGATCGT CGGCTTGACG 
GTGGTGGTTG TGATGCTCTC CATTGCGTGG CGACGCAATC ATTTCCTCAA CGCTACGCTC
TCGGTTATTG GGCTTAACGC GGCGCTGGTT TCGCTCTGGT TTGTTGGCCA GGCGGGCGCT
ATGGACGTTA CGCCGCTGAT GCGCGTTGAT GGTTTCGCCA TGCTTTACAC CGGGCTGGTA
TTGTTGGCGA GCCTCGCCAC CTGTACTTTC GCCTACCCGT GGCTTGAAGG CTATAACGAC
AACAAGGACG AGTTCTACCT GTTGGTGTTA ATTGCCGCGC TGGGCGGGAT CCTGCTGGCG
AATGCCAACC ATCTGGCGTC TCTGTTCCTC GGTATCGAAC TGATCTCTTT GCCGCTGTTT
GGCCTGGTCG GTTACGCTTT CCGCCAGAAA CGTTCACTGG AAGCCAGTAT CAAATACACC
ATCCTTTCTG CCGCAGCGTC TTCTTTCCTG CTGTTTGGTA TGGCGCTGGT GTATGCGCAG
TCTGGCGACC TGTCGTTTGT CGCGTTGGGT AAAAACCTTG GCGACGGTAT GCTCAACGAG
CCGCTGTTGC TGGCAGGTTT CGGCCTGATG ATTGTTGGCC TCGGCTTCAA ACTCTCTCTG
GTGCCGTTCC ACCTGTGGAC GCCAGACGTA TACCAGGGCG CGCCTGCGCC GGTTTCCACT
TTCCTGGCGA CGGCGAGCAA AATCGCTATC TTCGGTGTGG TGATGCGTCT GTTCCTCTAC
GCACCGGTGG GTGACAGCGA AGCGATTCGC GTGGTGCTGG CGATTATCGC CTTTGCCTCC
ATCATCTTCG GTAACCTGAT GGCGCTGAGC CAGACCAATA TCAAACGTCT GCTCGGTTAC
TCATCTATCT CTCACCTCGG CTATCTGCTG GTAGCGCTGA TTGCGCTGCA AACCGGCGAG
ATGTCGATGG AAGCGGTAGG GGTTTACCTG GCCGGTTATC TGTTCAGCAG CCTCGGCGCG
TTCGGCGTGG TCAGCCTGAT GTCCAGCCCG TATCGTGGCC CGGATGCTGA TTCCCTGTTC
TCTTACCGCG GTCTGTTCTG GCATCGTCCG ATCCTCGCGG CAGTGATGAC GGTGATGATG
CTGTCTCTGG CCGGTATCCC AATGACGCTG GGCTTTATCG GTAAGTTCTA CGTGCTGGCG
GTCGGTGTCC AGACACACTT GTGGTGGCTG GTGGGTGCCG TGGTTGTCGG TTCGGCAATC
GGCCTCTACT ACTACCTGCG CGTGGCGGTG AGCCTGTACC TGCACGCACC GGAACAACCG
GGTCGCGATG CACCGTCAAA CTGGCAGTAC AGCGCGGGCG GTATCGTGGT GCTGATTTCT
GCACTGTTGG TACTGGTGCT GGGTGTATGG CCACAACCGC TGATTAGTAT TGTGCGGTTA
GCAATGCCGC TGATGTAA
 
Protein sequence
MTITPQNLIA LLPLLIVGLT VVVVMLSIAW RRNHFLNATL SVIGLNAALV SLWFVGQAGA 
MDVTPLMRVD GFAMLYTGLV LLASLATCTF AYPWLEGYND NKDEFYLLVL IAALGGILLA
NANHLASLFL GIELISLPLF GLVGYAFRQK RSLEASIKYT ILSAAASSFL LFGMALVYAQ
SGDLSFVALG KNLGDGMLNE PLLLAGFGLM IVGLGFKLSL VPFHLWTPDV YQGAPAPVST
FLATASKIAI FGVVMRLFLY APVGDSEAIR VVLAIIAFAS IIFGNLMALS QTNIKRLLGY
SSISHLGYLL VALIALQTGE MSMEAVGVYL AGYLFSSLGA FGVVSLMSSP YRGPDADSLF
SYRGLFWHRP ILAAVMTVMM LSLAGIPMTL GFIGKFYVLA VGVQTHLWWL VGAVVVGSAI
GLYYYLRVAV SLYLHAPEQP GRDAPSNWQY SAGGIVVLIS ALLVLVLGVW PQPLISIVRL
AMPLM