Gene EcolC_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1372 
Symbol 
ID6068117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1505028 
End bp1505582 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content54% 
IMG OID641600794 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001724365 
Protein GI170019411 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.780748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.259355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTCG CTTTTTATAT CTGTGGCCTG ATAGCCATAC TTGCGACCTT GCGAGTGATC 
ACCCATACCA ATCCGGTACA CGCACTGCTG TACCTGATTA TTTCGCTGCT GGCGATTTCC
GGGGTGTTCT TCTCACTGGG CGCTTACTTC GCCGGTGCGC TGGAAATTAT CGTCTACGCG
GGTGCCATTA TGGTGCTGTT CGTGTTCGTG GTGATGATGC TCAACCTGGG CGGTTCAGAA
ATCGAACAGG AACGCCAGTG GCTGAAACCG CAGGTGTGGA TTGGTCCGGC AATTTTGTCG
GCCATCATGC TGGTGGTGAT TGTTTACGCC ATCCTCGGTG TTAACGATCA GGGTATCGAC
GGTACGCCAA TCAGTGCTAA AGCAGTGGGT ATTACGCTGT TCGGGCCTTA CGTACTGGCG
GTGGAACTGG CTTCTATGCT GCTGCTCGCA GGTCTGGTTG TGGCCTTCCA CGTCGGTCGT
GAAGAGCGTG CGGGTGAAGT GCTGAGCAAT CGTAAAGACG ACAGCGCGAA AAGAAAAACG
GAGGAGCACG CATGA
 
Protein sequence
MEFAFYICGL IAILATLRVI THTNPVHALL YLIISLLAIS GVFFSLGAYF AGALEIIVYA 
GAIMVLFVFV VMMLNLGGSE IEQERQWLKP QVWIGPAILS AIMLVVIVYA ILGVNDQGID
GTPISAKAVG ITLFGPYVLA VELASMLLLA GLVVAFHVGR EERAGEVLSN RKDDSAKRKT
EEHA