Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1353 |
Symbol | |
ID | 6068176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1481747 |
End bp | 1482289 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641600775 |
Product | NUDIX hydrolase |
Protein accession | YP_001724346 |
Protein GI | 170019392 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000289722 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.985207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGC GTCGTTTGGC AAGTACTGAA TGGGTGGATA TTGTCAATGA AGAGAACGAA GTCATTGCAC AAGCCAGCCG GGAACAAATG CGGGCACAGT GTCTGCGTCA TCGTGCAACT TACATCGTCG TGCATGATGG CATGGGCAAA ATTCTGGTCC AGCGTCGTAC CGAGACAAAA GACTTTTTAC CCGGCATGTT GGATGCGACC GCAGGCGGTG TAGTCCAGGC CGATGAGCAA CTGCTGGAAT CCGCGCGTCG CGAAGCGGAA GAAGAGTTGG GCATTGCCGG TGTCCCCTTT GCCGAGCACG GGCAGTTCTA TTTCGAAGAT AAAAATTGCC GTGTCTGGGG CGCGTTGTTC AGCTGCGTCT CTCACGGTCC CTTCGCCCTA CAGGAAGATG AAGTCAGTGA AGTTTGCTGG CTGACGCCGG AAGAAATCAC CGCACGCTGC GATGAGTTCA CTCCAGACTC GCTGAAAGCG CTGGCGTTGT GGATGAAGCG CAATGCCAAA AATGAAGCCG TAGAGACTGA AACGGCAGAA TGA
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Protein sequence | MEQRRLASTE WVDIVNEENE VIAQASREQM RAQCLRHRAT YIVVHDGMGK ILVQRRTETK DFLPGMLDAT AGGVVQADEQ LLESARREAE EELGIAGVPF AEHGQFYFED KNCRVWGALF SCVSHGPFAL QEDEVSEVCW LTPEEITARC DEFTPDSLKA LALWMKRNAK NEAVETETAE
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