Gene EcolC_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1346 
Symbol 
ID6068196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1476414 
End bp1477187 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content52% 
IMG OID641600768 
Producthistidine/lysine/arginine/ornithine transporter subunit 
Protein accessionYP_001724339 
Protein GI170019385 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.281005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA ATAAATTAAA CGTTATCGAT TTGCACAAAC GCTACGGCAA ACATGAAGTG 
CTGAAAGGGG TCTCACTGCA AGCGAATGCC GGAGATGTAA TAAGCATCAT CGGATCGTCG
GGATCGGGGA AAAGTACCTT TCTGCGCTGC ATTAACTTCC TCGAAAAACC GAGTGAAGGG
TCGATCGTGG TCAATGGCCA GACGATCAAT CTGGTGCGCG ACAAAGACGG TCAACTCAAA
GTCGCCGATA AAAATCAACT GCGCTTACTG CGCACACGCC TGACGATGGT ATTCCAGCAC
TTCAATCTCT GGAGCCATAT GACGGTGCTG GAAAACGTCA TGGAAGCGCC GATTCAGGTG
TTGGGCCTGA GCAAGCAGGA AGCGCGCGAG CGGGCGGTGA AGTATCTGGC GAAAGTCGGG
ATAGACGAAC GTGCGCAGGG GAAATATCCG GTGCATCTTT CCGGCGGTCA GCAACAGCGT
GTTTCTATCG CGCGGGCGCT GGCGATGGAA CCGGAAGTTT TACTGTTTGA TGAACCTACC
TCGGCGCTCG ATCCTGAACT GGTAGGCGAA GTGTTGCGTA TTATGCAGCA ACTGGCAGAA
GAGGGGAAAA CCATGGTGGT AGTGACTCAC GAAATGGGCT TTGCTCGCCA TGTTTCTACT
CATGTCATTT TCCTCCATCA GGGGAAAATA GAAGAAGAGG GCGCGCCGGA GCAGTTATTT
GGCAACCCGC AAAGCCCTCG TCTGCAACGG TTCCTTAAGG GATCGCTGAA ATAA
 
Protein sequence
MSENKLNVID LHKRYGKHEV LKGVSLQANA GDVISIIGSS GSGKSTFLRC INFLEKPSEG 
SIVVNGQTIN LVRDKDGQLK VADKNQLRLL RTRLTMVFQH FNLWSHMTVL ENVMEAPIQV
LGLSKQEARE RAVKYLAKVG IDERAQGKYP VHLSGGQQQR VSIARALAME PEVLLFDEPT
SALDPELVGE VLRIMQQLAE EGKTMVVVTH EMGFARHVST HVIFLHQGKI EEEGAPEQLF
GNPQSPRLQR FLKGSLK