Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1343 |
Symbol | |
ID | 6068205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1474135 |
End bp | 1474917 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641600765 |
Product | cationic amino acid ABC transporter, periplasmic binding protein |
Protein accession | YP_001724336 |
Protein GI | 170019382 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.908604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGGTGCTATC GCTCTCTCTG GTTCTGGCCT TCTCCAGCGC AACTGCGGCA TTTGCTGCGA TTCCGCAAAA CATCCGCATC GGTACCGACC CGACCTATGC GCCATTTGAA TCAAAAAATT CACAAGGCGA ACTGGTTGGC TTCGATATCG ATCTGGCAAA GGAATTATGC AAACGCATCA ATACGCAATG TACGTTTGTC GAAAATCCGC TGGATGCGTT AATCCCGTCC TTAAAAGCGA AGAAGATTGA CGCCATCATG TCATCGCTTT CCATTACGGA AAAACGTCAG CAAGAAATAG CCTTCACCGA CAAACTGTAC GCTGCCGATT CTCGTTTGGT GGTGGCGAAA AATTCTGACA TTCAGCCGAC AGTCGAGTCG CTGAAAGGCA AACGGGTAGG CGTATTGCAG GGCACCACCC AGGAGACGTT CGGTAATGAA CATTGGGCAC CAAAAGGCAT TGAAATCGTC TCGTATCAGG GGCAGGACAA CATTTATTCT GACCTGACTG CCGGACGTAT TGATGCCGCG TTCCAGGATG AGGTCGCCGC CAGCGAAGGT TTCCTCAAAC AACCTGTCGG TAAAGATTAC AAATTCGGTG GCCCGTCTGT TAAAGATGAA AAACTGTTTG GCGTAGGGAC CGGCATGGGC CTGCGTAAAG AAGATAACGA ACTGCGCGAA GCACTGAACA AAGCCTTTGC CGAAATGCGC GCTGACGGTA CTTACGAGAA ATTAGCGAAA AAGTACTTCG ATTTTGATGT TTATGGTGGC TAA
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Protein sequence | MKKLVLSLSL VLAFSSATAA FAAIPQNIRI GTDPTYAPFE SKNSQGELVG FDIDLAKELC KRINTQCTFV ENPLDALIPS LKAKKIDAIM SSLSITEKRQ QEIAFTDKLY AADSRLVVAK NSDIQPTVES LKGKRVGVLQ GTTQETFGNE HWAPKGIEIV SYQGQDNIYS DLTAGRIDAA FQDEVAASEG FLKQPVGKDY KFGGPSVKDE KLFGVGTGMG LRKEDNELRE ALNKAFAEMR ADGTYEKLAK KYFDFDVYGG
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