Gene EcolC_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1338 
Symbol 
ID6068224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1469239 
End bp1469901 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content57% 
IMG OID641600760 
Producthypothetical protein 
Protein accessionYP_001724331 
Protein GI170019377 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAGTA AGTTTCAGAA TCGGTTAGTG GGCACGATCG TGCTGGTGGC GCTGGGGGTG 
ATTGTACTTC CAGGGCTGCT GGACGGGCAG AAAAAACATT ATCAGGATGA GTTCGCGGCT
ATCCCGCTGG TGCCGAAAGC GGGCGATCGT GATGAGCCTG ATATGATGCC AGCCGCCACC
CAGGCGTTGC CGACGCAGCC GCCGGAAGGC GCAGCGGAAG AGGTGCGGGC AGGTGATGCC
GCAGCACCGT CGCTCGATCC GGCCACTATT GCAGCCAATA ACACCGAGTT TGAACCGGAA
CCTGCACCGG TCGCCCCACC GAAGCCGAAA CCGGTGGAGC CGCCTAAACC GAAGGTTGAA
GCACCACCTG CGCCGAAGCC AGAACCGAAG CCGGTCGTGG AAGAAAAAGC TGCACCGACG
GGTAAAGCCT ATGTTGTGCA ACTGGGTGCG CTGAAAAATG CCGATAAAGT GAATGAGATT
GTCGGTAAGC TGCGCGGTGC CGGTTATCGG GTTTATACGT CGCCATCCAC GCCAGTGCAG
GGTAAAATTA CCCGTATTCT GGTTGGGCCA GATGCCTCGA AAGATAAGCT GAAAGGTTCG
CTGGGTGAGT TGAAGCAACT TTCTGGCTTA AGTGGCGTGG TAATGGGCTA TACGCCGAAT
TAA
 
Protein sequence
MASKFQNRLV GTIVLVALGV IVLPGLLDGQ KKHYQDEFAA IPLVPKAGDR DEPDMMPAAT 
QALPTQPPEG AAEEVRAGDA AAPSLDPATI AANNTEFEPE PAPVAPPKPK PVEPPKPKVE
APPAPKPEPK PVVEEKAAPT GKAYVVQLGA LKNADKVNEI VGKLRGAGYR VYTSPSTPVQ
GKITRILVGP DASKDKLKGS LGELKQLSGL SGVVMGYTPN