Gene EcolC_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1318 
Symbol 
ID6068423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1449811 
End bp1450299 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content54% 
IMG OID641600740 
Producthypothetical protein 
Protein accessionYP_001724311 
Protein GI170019357 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TCCTGCTCCT TTTACTGTGC GCTGGTTGCG GGGCTGTGCT GGCGGCGGAA 
GATGACATCA CATTCCACGG TACGCTGATG TCGCCGCCCG CCTGTAGCAT CAGCGGCGGG
CAAACCATCG AAGTGCAATT TCGCGATCTC ATTATCGACA GCATTGACGG CAATTATGGT
CGTCAGGAAG TGGACTACGA ACTGAGCTGT GAGTCTGATG TCCGCGATCC CGAGTGGAAT
ATGACACTCT CATGGACGGG GACTGCCACC TCCTACAACG ACTCTGCTAT TGAGACGGAT
GTACCGGGCT TCGGAATTGA GCTTCAGCAT GACGGTCAGC GTTTTAAGCT CAACGAGCCG
CTTTCCATTA ACGCCACCGA TTTTAGCCAG AAGCCAAAGC TGGAGGCGGT ACCGGTCAAA
GCGGCTGATG CGGTGCTGAC GGACACGACC TTTTCTGCTT ACGCAACCTT ACGGGTGGAT
TACCAATGA
 
Protein sequence
MKKFLLLLLC AGCGAVLAAE DDITFHGTLM SPPACSISGG QTIEVQFRDL IIDSIDGNYG 
RQEVDYELSC ESDVRDPEWN MTLSWTGTAT SYNDSAIETD VPGFGIELQH DGQRFKLNEP
LSINATDFSQ KPKLEAVPVK AADAVLTDTT FSAYATLRVD YQ