| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1316 |
|---|
| Symbol | |
|---|
| ID | 6068441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1448537 |
|---|
| End bp | 1449289 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641600738 |
|---|
| Product | pili assembly chaperone |
|---|
| Protein accession | YP_001724309 |
|---|
| Protein GI | 170019355 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAATC TGACTAACAC TGCAAAAATC GTTGTCCCGG CACTGGCGCT GCTGGCGACA
GCGGTCAGTT TCTCCAGCCA CGCTTCGGTG ACGCCCGACA GGACACGGCT GGTGTTTAAC
GAAAGCGACA AGTCCATCAG CGTCACGCTG CGCAACAACG ATCCCAAACT GCCTTATCTG
GCGCAGAGCT GGATAGAGGA TGCAAAGGGC AACAAAATCA GCTCGCCGCT TGCGGTGCTT
CCGCCAGTGC AGCGCATCGA TGCGATGATG AACGGCCAGG TGAAGGTGCA GGGGCTGCCG
GATATCAACA AACTGCCGGC CGACCGCGAG AGCGTGTTCT ATTTCAACGT GCGCGAAATT
CCGCCGAAAT CAAATAAACC GAACACACTG CAGATTGCGC TGCAGACGCG TATCAAACTG
TTCTGGCGAC CGAAGGCGCT GGAGAACACC AGCATGAAAA GTCCGTGGCA GCATAAGGTG
ACGCTCATCC GTAACGGCCA GGACTTCACC GTCAATAACC CGACGCCGTA CTACGTGATC
ATCAGCAACG CCAGCGCTAA AAAAGGCGGC AACCCGCCGG CGGGATTCAC ACCGCTGATG
ATGGAGCCGA AAACCTCCGC ACCGCTGAAT GCGAAGATGG ACAGCGTGCC GGTGCTGACC
TACATCAACG ACTACGGCGC GCGGATGCCG CTGTACTTCA AATGCACCGG CAACAACTGC
CAGGTGGATG AAGAGCAGAG CCGCAAAGGC TGA
|
|---|
| Protein sequence | MFNLTNTAKI VVPALALLAT AVSFSSHASV TPDRTRLVFN ESDKSISVTL RNNDPKLPYL
AQSWIEDAKG NKISSPLAVL PPVQRIDAMM NGQVKVQGLP DINKLPADRE SVFYFNVREI
PPKSNKPNTL QIALQTRIKL FWRPKALENT SMKSPWQHKV TLIRNGQDFT VNNPTPYYVI
ISNASAKKGG NPPAGFTPLM MEPKTSAPLN AKMDSVPVLT YINDYGARMP LYFKCTGNNC
QVDEEQSRKG
|
|---|
| |