| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1302 |
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| Symbol | |
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| ID | 6068565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1428907 |
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| End bp | 1430445 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641600723 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001724295 |
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| Protein GI | 170019341 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCA CTAAATCAAC TCCGGCACCA TTAACCGGTG GGACGTTATG GTGCGTCACT
ATTGCATTGT CATTAGCGAC ATTTATGCAA ATGTTGGATT CCACTATTTC TAACGTCGCA
ATACCGACAA TATCTGGCTT TCTGGGAGCA TCAACAGACG AAGGCACCTG GGTTATCACC
TCGTTTGGTG TAGCAAATGC CATTGCGATC CCTGTTACTG GCAGGTTGGC ACAAAGAATA
GGCGAATTAA GATTATTTTT ACTTTCAGTC ACTTTTTTTT CGCTGTCTTC ATTAATGTGT
AGCCTATCGA CCAATCTTGA TGTGCTGATA TTTTTTAGAG TCGTTCAGGG GTTAATGGCG
GGGCCGTTAA TTCCACTGTC ACAGAGTTTA TTATTAAGGA ATTATCCGCC AGAAAAAAGA
ACATTTGCTC TGGCATTATG GTCAATGACC GTGATTATCG CTCCGATATG TGGGCCGATA
TTGGGCGGTT ATATTTGTGA TAACTTTAGC TGGGGTTGGA TATTTTTAAT CAATGTCCCT
ATGGGGATTA TCGTCCTGAC ATTATGCTTA ACCTTACTTA AAGGAAGAGA AACTGAGACT
TCACCGGTCA AAATGAATCT ACCAGGACTG ACCCTGTTAG TGCTCGGTGT TGGTGGCTTG
CAAATTATGC TTGATAAAGG GCGCGATCTG GATTGGTTCA ACTCGAGTAC AATAATAATA
TTAACAGTAG TATCAGTTAT TTCTCTGATC TCTTTAGTCA TTTGGGAGTC GACCTCAGAG
AACCCGATTC TTGATCTCAG TTTGTTTAAG TCCCGTAACT TCACCATTGG TATTGTGAGT
ATCACATGCG CGTATTTATT TTACTCTGGA GCGATCGTCC TTATGCCGCA GTTACTCCAG
GAAACGATGG GGTATAATGC GATATGGGCC GGACTTGCTT ATGCGCCCAT CGGCATCATG
CCACTATTAA TTTCACCTTT GATAGGACGT TATGGCAACA AAATAGACAT GCGGTTGTTA
GTGACATTTA GTTTTTTGAT GTATGCGGTT TGCTATTACT GGCGTTCTGT GACATTTATG
CCAACGATTG ATTTTACAGG CATCATTTTG CCGCAGTTTT TTCAGGGATT CGCCGTTGCC
TGTTTCTTTT TACCCTTAAC AACGATTTCG TTTTCAGGCT TGCCAGATAA TAAATTTGCC
AATGCCTCGA GTATGAGTAA TTTTTTTCGT ACCTTGTCAG GATCAGTTGG TACGTCGTTG
ACAATGACGC TGTGGGGACG ACGCGAATCG TTACACCATA GTCAGTTGAC AGCAACCATC
GATCAATTTA ACCCCGTGTT TAATTCATCG TCACAAATTA TGGATAAATA TTATGGTTCG
CTTTCAGGAG TTCTTAATGA AATTAATAAT GAAATAACCC AGCAGTCACT TTCTATTTCT
GCAAATGAGA TTTTCCGTAT GGCGGCTATT GCTTTTATCT TACTTACGGT TTTGGTTTGG
TTTGCGAAAC CGCCGTTTAC AGCGAAAGGC GTTGGGTGA
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| Protein sequence | MAITKSTPAP LTGGTLWCVT IALSLATFMQ MLDSTISNVA IPTISGFLGA STDEGTWVIT
SFGVANAIAI PVTGRLAQRI GELRLFLLSV TFFSLSSLMC SLSTNLDVLI FFRVVQGLMA
GPLIPLSQSL LLRNYPPEKR TFALALWSMT VIIAPICGPI LGGYICDNFS WGWIFLINVP
MGIIVLTLCL TLLKGRETET SPVKMNLPGL TLLVLGVGGL QIMLDKGRDL DWFNSSTIII
LTVVSVISLI SLVIWESTSE NPILDLSLFK SRNFTIGIVS ITCAYLFYSG AIVLMPQLLQ
ETMGYNAIWA GLAYAPIGIM PLLISPLIGR YGNKIDMRLL VTFSFLMYAV CYYWRSVTFM
PTIDFTGIIL PQFFQGFAVA CFFLPLTTIS FSGLPDNKFA NASSMSNFFR TLSGSVGTSL
TMTLWGRRES LHHSQLTATI DQFNPVFNSS SQIMDKYYGS LSGVLNEINN EITQQSLSIS
ANEIFRMAAI AFILLTVLVW FAKPPFTAKG VG
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