| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1280 |
|---|
| Symbol | |
|---|
| ID | 6068727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 1400199 |
|---|
| End bp | 1401455 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641600701 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001724273 |
|---|
| Protein GI | 170019319 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.373691 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCATC CGCGAGCCAG AACCATGTTG TTATTATCGC TCCCCGCCGT GGCAATTGGG
ATTGCGTCCA GTCTTATTCT GATTGTGGTG ATGAAAATCG CCTCGGTATT ACAGAATTTG
CTCTGGCAAC GACTGCCGGG AACTCTGGGG ATAGCCCAGG ATTCACCCCT CTGGATCATC
GGTGTATTAA CGCTAACGGG TATTGCGGTG GGGTTGGTTA TCCGTTTCAG CCAGGGTCAT
GCCGGACCAG ACCCCGCCTG TGAACCGCTG ATCGGCGCAC CGGTTCCGCC CTCTGCGCTA
CCTGGACTTA TCGTAGCATT AATTCTCGGT CTTGCTGGCG GCGTCAGCCT GGGGCCGGAA
CATCCGATCA TGACCGTCAA TATCGCCCTT GCGGTTGCCA TTGGCGCTCG TCTGTTACCG
CGCGTCAACC GAATGGAGTG GACTATTTTA GCCTCTGCCG GAACCATCGG CGCACTGTTT
GGCACTCCTG TTGCGGCGGC GTTGATATTT TCGCAAACCT TAAATGGCAG TAGTGAAGTT
CCGCTATGGG ATCGTCTCTT TGCGCCGTTA ATGGCGGCAG CAGCTGGTGC ACTTACTACC
GGATTATTTT TCCATCCTCA TTTTTCACTG CCCATTGCTC ATTACGGACA GATGGAAATG
ACCGATATTC TCAGCGGTGC AATTGTCGCG GCGATTGCCA TCGCAGCAGG GATGGTCGCC
GTATGGTGCT TACCACGGTT GCACGCGATG ATGCATCAAA TGAAAAATCC GGTGCTCGTG
CTGGGTATTG GCGGATTTAT TCTCGGTATT CTGGGGGTTA TTGGTGGACC AGTTTCGCTG
TTTAAAGGGC TGGATGAGAT GCAGCAGATG GTGGCAAATC AGGCTTTCAG CACCAGCGAT
TACTTTTTGC TGGCGGTAAT TAAACTTGCC GCCCTGGTCG TTGCTGCCGC CAGTGGCTTT
CGCGGTGGGC GAATCTTCCC GGCAGTGTTT GTCGGCGTGG CATTAGGGTT GATGCTGCAT
GAGCACGTTC CCGCCGTACC AGCGGCAATA ACCGTTTCTT GCGCTATTCT CGGCATCGTG
CTGGTGGTAA CACGCGATGG CTGGTTAAGT CTTTTTATGG CGGCAGTCGT TGTACCCAAT
ACCACATTGC TACCGCTGCT CTGTATCGTC ATGCTTCCGG CATGGCTGTT ATTAGCAGGT
AAGCCGATGA TGATGGTCAA TCGTCCGAAG CAACAGCCAC CCCACGATAA CGTTTAG
|
|---|
| Protein sequence | MLHPRARTML LLSLPAVAIG IASSLILIVV MKIASVLQNL LWQRLPGTLG IAQDSPLWII
GVLTLTGIAV GLVIRFSQGH AGPDPACEPL IGAPVPPSAL PGLIVALILG LAGGVSLGPE
HPIMTVNIAL AVAIGARLLP RVNRMEWTIL ASAGTIGALF GTPVAAALIF SQTLNGSSEV
PLWDRLFAPL MAAAAGALTT GLFFHPHFSL PIAHYGQMEM TDILSGAIVA AIAIAAGMVA
VWCLPRLHAM MHQMKNPVLV LGIGGFILGI LGVIGGPVSL FKGLDEMQQM VANQAFSTSD
YFLLAVIKLA ALVVAAASGF RGGRIFPAVF VGVALGLMLH EHVPAVPAAI TVSCAILGIV
LVVTRDGWLS LFMAAVVVPN TTLLPLLCIV MLPAWLLLAG KPMMMVNRPK QQPPHDNV
|
|---|
| |