Gene EcolC_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1261 
Symbol 
ID6064952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1378892 
End bp1379401 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content47% 
IMG OID641600676 
ProductPTS system glucose-specific transporter subunit 
Protein accessionYP_001724254 
Protein GI170019300 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000812221 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000317921 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTTTGT TCGATAAACT GAAATCTCTG GTTTCCGACG ACAAGAAGGA TACCGGAACT 
ATTGAGATCA TTGCTCCGCT CTCTGGCGAG ATCGTCAATA TCGAAGACGT GCCGGATGTC
GTTTTTGCGG AAAAAATCGT TGGTGATGGT ATTGCTATCA AACCAACGGG TAACAAAATG
GTCGCGCCAG TAGACGGCAC CATTGGTAAA ATCTTTGAAA CCAACCACGC ATTCTCTATC
GAATCTGATA GCGGCGTTGA ACTGTTCGTC CACTTCGGTA TCGACACCGT TGAACTGAAA
GGCGAAGGCT TCAAGCGTAT TGCTGAAGAA GGTCAGCGCG TGAAAGTTGG CGATACTGTC
ATTGAATTTG ATCTGCCGCT GCTGGAAGAG AAAGCCAAGT CTACCCTGAC TCCGGTTGTT
ATCTCCAACA TGGACGAAAT CAAAGAACTG ATCAAACTGT CCGGTAGCGT AACCGTGGGT
GAAACCCCGG TTATCCGCAT CAAGAAGTAA
 
Protein sequence
MGLFDKLKSL VSDDKKDTGT IEIIAPLSGE IVNIEDVPDV VFAEKIVGDG IAIKPTGNKM 
VAPVDGTIGK IFETNHAFSI ESDSGVELFV HFGIDTVELK GEGFKRIAEE GQRVKVGDTV
IEFDLPLLEE KAKSTLTPVV ISNMDEIKEL IKLSGSVTVG ETPVIRIKK