Gene EcolC_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1244 
Symbol 
ID6066639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1363155 
End bp1364024 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content50% 
IMG OID641600659 
ProductN-acetylmuramoyl-l-alanine amidase I 
Protein accessionYP_001724237 
Protein GI170019283 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT TTAAACCACT AAAAACACTC ACTTCGCGCC GCCAGGTGCT GAAAGCCGGT 
TTGGCTGCCC TGACGTTGTC AGGAATGTCG CAAGCCATCG CCAAAGACGA ACTTTTAAAA
ACCAGCAACG GACACAGCAA GCCGAAAGCC AAAAAATCTG GCGGCAAACG TGTCGTTGTT
CTCGATCCAG GTCACGGCGG AATTGATACC GGAGCGATCG GACGCAACGG TTCGAAAGAA
AAACATGTGG TGCTGGCGAT TGCTAAAAAC GTCCGTTCCA TTTTGCGTAA TCATGGGATT
GATGCGCGTT TAACGCGTTC TGGCGATACG TTTATCCCAC TTTACGATCG CGTTGAAATC
GCCCATAAAC ATGGCGCAGA TCTGTTTATG TCAATTCATG CCGATGGCTT TACCAACCCG
AAAGCTGCCG GTGCTTCGGT ATTTGCCCTC TCTAACCGTG GGGCAAGTAG CGCAATGGCG
AAATACCTGT CTGAACGCGA AAACCGCGCC GATGAAGTTG CCGGTAAAAA GGCGACTGAC
AAGGATCACC TATTGCAACA AGTGCTGTTT GATCTGGTGC AAACAGATAC CATTAAAAAT
AGTCTGACGC TCGGCTCGCA TATTCTGAAG AAGATTAAGC CGGTGCATAA ACTGCACAGC
CGCAACACCG AACAAGCGGC ATTTGTGGTG TTGAAATCAC CGTCGGTTCC TTCGGTGCTG
GTGGAAACCT CGTTTATCAC CAACCCGGAA GAAGAACGGC TGTTAGGCAC GGCGGCGTTT
CGTCAGAAAA TCGCCACAGC GATTGCTGAA GGCGTGATCA GTTATTTCCA CTGGTTCGAC
AACCAGAAAG CACATTCGAA AAAGCGATAA
 
Protein sequence
MSTFKPLKTL TSRRQVLKAG LAALTLSGMS QAIAKDELLK TSNGHSKPKA KKSGGKRVVV 
LDPGHGGIDT GAIGRNGSKE KHVVLAIAKN VRSILRNHGI DARLTRSGDT FIPLYDRVEI
AHKHGADLFM SIHADGFTNP KAAGASVFAL SNRGASSAMA KYLSERENRA DEVAGKKATD
KDHLLQQVLF DLVQTDTIKN SLTLGSHILK KIKPVHKLHS RNTEQAAFVV LKSPSVPSVL
VETSFITNPE EERLLGTAAF RQKIATAIAE GVISYFHWFD NQKAHSKKR