Gene EcolC_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1243 
Symbol 
ID6066827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1362252 
End bp1363151 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content55% 
IMG OID641600658 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001724236 
Protein GI170019282 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCG ACGCACACCA GGTTAAACAG TTTCTGCTCA ACCTTCAGGA TACGATTTGT 
CAGCAGCTGA CCGCCGTCGA TGGCGCAGAA TTTGTCGAAG ATAGTTGGCA GCGCGAAGCT
GGCGGCGGCG GGCGTAGTCG GGTGTTGCGT AATGGTGGTG TTTTCGAACA GGCAGGCGTC
AACTTTTCGC ATGTCCACGG TGAGGCGATG CCTGCTTCCG CCACCGCTCA TCGCCCGGAA
CTTGCCGGGC GCAGTTTCGA GGCGATGGGC GTTTCACTGG TAGTGCATCC GCATAACCCG
TATGTTCCCA CCAGCCACGC GAATGTGCGG TTTTTTATTG CCGAAAAACC GGGTGCCGAT
CCCGTCTGGT GGTTTGGCGG TGGCTTCGAC TTAACCCCAT TCTATGGTTT TGAAGAAGAT
GCTATTCACT GGCATCGCAC CGCCCGTGAC CTGTGCCTGC CATTTGGCGA AGACGTTTAT
CCCCGTTACA AAAAGTGGTG CGACGAATAC TTCTACCTCA AACATCGCAA CGAACAGCGC
GGTATTGGCG GGCTGTTCTT TGATGACCTG AACACGCCAG ATTTCGACCG CTGTTTTGCC
TTTATGCAGG CGGTAGGCAA AGGCTACACC GACGCTTATT TACCAATTGT CGAGCGACGG
AAAGCGATGG CCTACGGCGA GCGCGAGCGC AATTTCCAGT TATATCGTCG CGGTCGTTAT
GTCGAGTTCA ATCTGGTCTG GGATCGCGGC ACGCTGTTTG GCCTGCAAAC TGGCGGGCGC
ACCGAGTCTA TCCTGATGTC AATGCCGCCA CTGGTACGCT GGGAATATGA TTATCAGCCA
AAAGATGGCA GCCCAGAAGC GGCGTTAAGT GAGTTTATTA AGGTCAGGGA TTGGGTGTAA
 
Protein sequence
MKPDAHQVKQ FLLNLQDTIC QQLTAVDGAE FVEDSWQREA GGGGRSRVLR NGGVFEQAGV 
NFSHVHGEAM PASATAHRPE LAGRSFEAMG VSLVVHPHNP YVPTSHANVR FFIAEKPGAD
PVWWFGGGFD LTPFYGFEED AIHWHRTARD LCLPFGEDVY PRYKKWCDEY FYLKHRNEQR
GIGGLFFDDL NTPDFDRCFA FMQAVGKGYT DAYLPIVERR KAMAYGERER NFQLYRRGRY
VEFNLVWDRG TLFGLQTGGR TESILMSMPP LVRWEYDYQP KDGSPEAALS EFIKVRDWV