Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1237 |
Symbol | |
ID | 6067412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1356303 |
End bp | 1357508 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641600652 |
Product | integrase family protein |
Protein accession | YP_001724230 |
Protein GI | 170019276 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.184026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAAGA CACCACTGAC AGCAAAGGCC ATAGATGCCG CACAACCACA GGACAAGCCC TACAAACTCA CAGATTCACA AACGCCAGGC CTTTTCTTGC TGGTCCATCC CAACGGTAGT AAGTACTGGC GATTCCGGTA CTGGATAGAT AAGAAAGAGC GATTACAGGC CGTCGGGGTA TATCCGCTGA TTAGCCTCAA GGAAGCCCGC AAACGCGCCA CAGAGAGCCG TTTACTGATA GCCCAGGGAA TTGACCCAAT GGAAGAAGCG CGCAAGGAGA AAGCCATTGA TGCGCTCAAC ATGGCGGCAA GTTTTAAGAC CGTGGCGGAG GACTGGCTTG CTACCAGGGT TAGCGGTTGG TCAGAGTCCT ACACGAAACA GGTCAGATCG GCACTGGAGA AAGACGTTTA TCCGGTACTT GGCAAGCGTT CAATCGTCGA TATAACGGCC CGTGATGTTC TGTCATTGCT TCAGAAGAAA GAGCGCACCG CACCGGAACA AGCCAGGAAG CTACGCCAGC GTATCGGGGA GATCTTCAAA TTTGCCGTTA TCACCGAACT GGTTAACCGG AATCCGGTTG CAGATCTGGA TACGGCATTG AAAGCCAGAC GCCCAGGCCA TAACGCATGG ATACCGATTA GTGAAATTCC GGCATTCTAC AAAGCCCTTG AGAGAGCCGG GAGCGTCCAG ATTCAGACGG CAATACGTTT GCTTATCCTC ACGGCTTTGA GGACGGCAGA GCTTCGTTTA ATGCGCTGGG AGTGGGTGGA TCTGGAGTCG GCAACAATCA CCCTACCCGC TGAAGTCATG AAGGCCCGCC GACCGCATGT AGTCCCGTTA TCCCGGCAAG CGGTCGAGCT ATTACAGGAC CAGTTTACCC GCAGCGGATA CAGTGCTTTC GTCTTTCCGG GCCGATTCAT GGATAAGCCA TTGTCAGCCA GTGCGATCCT TAAAGCCCTG GAGCGTATCG GGTACAAGTC GATCGCCACT GGTCATGGCT GGAGGACAAC GTTCAGCACA TCACTTAACG AAAGCGGCAG ATACAATCCC GACTGGATCG AAATCCAACT GGCCCACGTT CCGAAAGGTG TGCGCGGCGT TTATAACCAG GCGGCCTATC TGAAGCAACG GCGGGCCATG ATGCAGAACT ACAGCGACGC CATCGACCAG ATATTGGCTG GTGACGGTAA TCCACTTGAA CCGTGA
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Protein sequence | MSKTPLTAKA IDAAQPQDKP YKLTDSQTPG LFLLVHPNGS KYWRFRYWID KKERLQAVGV YPLISLKEAR KRATESRLLI AQGIDPMEEA RKEKAIDALN MAASFKTVAE DWLATRVSGW SESYTKQVRS ALEKDVYPVL GKRSIVDITA RDVLSLLQKK ERTAPEQARK LRQRIGEIFK FAVITELVNR NPVADLDTAL KARRPGHNAW IPISEIPAFY KALERAGSVQ IQTAIRLLIL TALRTAELRL MRWEWVDLES ATITLPAEVM KARRPHVVPL SRQAVELLQD QFTRSGYSAF VFPGRFMDKP LSASAILKAL ERIGYKSIAT GHGWRTTFST SLNESGRYNP DWIEIQLAHV PKGVRGVYNQ AAYLKQRRAM MQNYSDAIDQ ILAGDGNPLE P
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