Gene EcolC_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1220 
Symbol 
ID6067441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1340247 
End bp1340582 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID641600635 
Productmicrocompartments protein 
Protein accessionYP_001724213 
Protein GI170019259 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTC CCGTTCTGGA CCCTGATAAA GAGGAAAGCA CAATGGAAGC ATTAGGAATG 
ATCGAAACCC GGGGCCTGGT TGCACTGATT GAGGCTTCTG ACGCGATGGT GAAAGCTGCG
CGCGTCAAGC TGGTTGGTGT TAAGCAGATT GGCGGCGGCC TGTGTACTGC CATGGTTCGT
GGTGATGTTG CAGCCTGTAA AGCCGCGACC GATGCAGGTG CCGCAGCGGC ACAGCGTATC
GGCGAGCTGG TATCTGTACA CGTTATCCCG CGTCCGCACG GCGACCTGGA AGAAGTCTTC
CCGATCGGCC TGAAAGGCGA TAGCAGCAAC CTGTAA
 
Protein sequence
MNGPVLDPDK EESTMEALGM IETRGLVALI EASDAMVKAA RVKLVGVKQI GGGLCTAMVR 
GDVAACKAAT DAGAAAAQRI GELVSVHVIP RPHGDLEEVF PIGLKGDSSN L