Gene EcolC_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1197 
SymbolgcvR 
ID6064771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1312262 
End bp1312834 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content50% 
IMG OID641600612 
Productglycine cleavage system transcriptional repressor 
Protein accessionYP_001724190 
Protein GI170019236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACTGT CATCGCAACA TTATCTGGTG ATCACTGCGT TGGGTGCCGA TCGCCCTGGA 
ATTGTGAACA CCATCACCCG TCATGTCAGT AGTTGCGGCT GTAATATTGA AGACAGTCGC
CTGGCGATGC TGGGAGAAGA GTTCACGTTT ATCATGCTGC TTTCCGGTTC ATGGAATGCC
ATTACTCTGA TTGAATCAAC GTTACCGTTG AAAGGTGCAG AACTGGATCT TTTAATCGTG
ATGAAGCGCA CGACGGCGCG TCCGCGTCCG CCAATGCCAG CATCTGTCTG GGTTCAGGTC
GATGTGGCAG ACTCCCCGCA TTTAATTGAA CGCTTCACAG CACTTTTCGA CGCGCATCAT
ATGAACATTG CGGAGCTGGT GTCGCGCACG CAACCTGCTG AAAATGAACG GGCTGCGCAG
TTGCATATTC AGATAACCGC CCACAGCCCC GCATCTGCGG ACGCAGCAAA TATTGAGCAA
GCGTTCAAAG CCCTATGTAC AGAACTCAAT GCACAAGGCA GTATTAACGT CGTCAATTAT
TCCCAACATG ATGAACAGGA TGGAGTTAAG TAA
 
Protein sequence
MTLSSQHYLV ITALGADRPG IVNTITRHVS SCGCNIEDSR LAMLGEEFTF IMLLSGSWNA 
ITLIESTLPL KGAELDLLIV MKRTTARPRP PMPASVWVQV DVADSPHLIE RFTALFDAHH
MNIAELVSRT QPAENERAAQ LHIQITAHSP ASADAANIEQ AFKALCTELN AQGSINVVNY
SQHDEQDGVK