| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1194 |
|---|
| Symbol | |
|---|
| ID | 6065193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 1308904 |
|---|
| End bp | 1310922 |
|---|
| Gene Length | 2019 bp |
|---|
| Protein Length | 672 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641600609 |
|---|
| Product | hydrogenase 4 subunit B |
|---|
| Protein accession | YP_001724187 |
|---|
| Protein GI | 170019233 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCCC TGCAATTATT AACCTGGTCG CTGATCCTCT ATCTGTTTGC CAGTCTGGCT
TCGCTGTTTT TACTCGGTCT GGACAGACTG GCTATTAAGC TTTCCGGCAT CACATCGCTG
GTGGGCGGCG TGATTGGCAT CATCAGCGGA ATTACGCAAT TACATGCTGG TGTAACTTTA
GTCGCCCATT TTGCCACCCC TTTTGACTTT GCCGATTTAA CCCTGCGAAT GGATAGCCTC
TCGGCATTTA TGGTGCTGGT TATCTCCTTG CTGGTGGTGG TTTGTTCGCT CTATTCATTG
ACTTATATGC GCGAATACGA GGGCAAAGGC GCGGCGGCGA TGGGCTTCTT TATGAATCTT
TTCATCGCAT CGATGGTTGC CCTGCTGGTG ATGGACAACG CTTTTTGGTT CATCGTGCTG
TTTGAAATGA TGTCGCTGTC TTCCTGGTTT CTGGTCATTG CCAGGCAGGA TAAAACGTCG
ATCAACGCTG GCATGCTCTA CTTTTTTATC GCCCACGCCG GATCGGTGCT GATAATGATC
GCCTTCTTGC TGATGGGGCG CGAAAGCGGC AGCCTCGATT TTGCCAGTTT CCGCACGCTT
TCACTTTCTC CGGGGCTGGC GTCGGCGGTG TTCCTGCTGG CCTTTTTCGG TTTTGGCGCG
AAAGCCGGGA TGATGCCGTT GCACAGCTGG TTGCCGCGCG CTCACCCTGC CGCACCATCG
CACGCTTCAG CGTTGATGTC TGGCGTAATG GTCAAAATCG GTATTTTCGG CATCCTGAAA
GTGGCGATGG ATCTGCTGGC GCAAACGGGT TTGCCGCTGT GGTGGGGCAT TCTGGTGATG
GCGATCGGCG CAATCTCCGC GCTCCTGGGC GTGCTGTATG CGCTGGCGGA ACAGGATATC
AAACGGCTAC TGGCCTGGAG TACCGTCGAA AACGTCGGCA TTATTTTGCT GGCGGTCGGT
GTGGCGATAG TCGGTCTGTC ACTGCACGAC CCGCTGCTCA CCGTGGTTGG ACTGCTCGGC
GCACTGTTTC ATCTGCTCAA CCATGCGCTG TTCAAAGGGC TGCTATTTCT CGGCGCGGGC
GCGATTATTT CGCGTTTGCA TACCCACGAC ATGGAAAAAA TGGGGGCACT GGCGAAACGG
ATGCCGTGGA CAGCCGCAGC ATGCCTGATT GGTTGCCTGG CGATATCAGC CCTTCCTCCG
CTGAATGGTT TTATCAGCGA ATGGTACACC TGGCAGTCGC TGTTCTCACT AAGTCGTGTG
GAAGCCGTAG CGCTACAACT TGCGGGTCCT ATTGCTATGG TAATGCTGGC AGTCACTGGT
GGGCTGGCAG TAATGTGCTT CGTAAAAATG TACGGTATTA CTTTCTGTGG TGCGCCGCGC
AGTACACACG CTGAAGAGGC ACAGGAAGTG CCAAATACGA TGATCGTCGC CATGCTACTG
CTCGCGGCAC TCTGCGTATT AATTGCGCTT AGTGCCAGTT GGCTGGCACC GAAGATAATG
CATATTGCCC ATGCGTTTAC CGATACCCCT CCCGTCACTG TCGCCAGCGG AATAGCACTT
GTACCCGGCA CGTTTCATAC ACGGGTCACT CCTTCATTAC TGTTGCTGTT ACTACTGGCG
ATGCCTTTGC TGCCTGGCCT TTACTGGCTG TGGTGTCGTT CGCGCCGCGC AGCGTTTCGT
CGCACAGGAG ATGCCTGGGC ATGCGGCTAC AGCTGGGAAA ATGCGATGGC CCCGTCAGGC
AATGGCGTGA TGCAGCCGCT GCGTGTGGTC TTTTCTGCGC TATTTCGTCT ACGACAACAG
CTCGACCCTA CGCTGAGGCT AAATAAAGGT CTTGCGCACG TCACCGCCAG GGCTCAGAGC
ACAGAACCCT TCTGGGATGA GCGGGTGATC CGCCCCATCG TGAGCGCCAC CCAACGGCTG
GCCAAAGAAA TACAGCATCT GCAAAGCGGC GACTTTCGTC TCTATTGCCT GTATGTGGTC
GCCGCACTGG TTGTGCTGCT AATCGCTATT GCCGTCTAA
|
|---|
| Protein sequence | MDALQLLTWS LILYLFASLA SLFLLGLDRL AIKLSGITSL VGGVIGIISG ITQLHAGVTL
VAHFATPFDF ADLTLRMDSL SAFMVLVISL LVVVCSLYSL TYMREYEGKG AAAMGFFMNL
FIASMVALLV MDNAFWFIVL FEMMSLSSWF LVIARQDKTS INAGMLYFFI AHAGSVLIMI
AFLLMGRESG SLDFASFRTL SLSPGLASAV FLLAFFGFGA KAGMMPLHSW LPRAHPAAPS
HASALMSGVM VKIGIFGILK VAMDLLAQTG LPLWWGILVM AIGAISALLG VLYALAEQDI
KRLLAWSTVE NVGIILLAVG VAIVGLSLHD PLLTVVGLLG ALFHLLNHAL FKGLLFLGAG
AIISRLHTHD MEKMGALAKR MPWTAAACLI GCLAISALPP LNGFISEWYT WQSLFSLSRV
EAVALQLAGP IAMVMLAVTG GLAVMCFVKM YGITFCGAPR STHAEEAQEV PNTMIVAMLL
LAALCVLIAL SASWLAPKIM HIAHAFTDTP PVTVASGIAL VPGTFHTRVT PSLLLLLLLA
MPLLPGLYWL WCRSRRAAFR RTGDAWACGY SWENAMAPSG NGVMQPLRVV FSALFRLRQQ
LDPTLRLNKG LAHVTARAQS TEPFWDERVI RPIVSATQRL AKEIQHLQSG DFRLYCLYVV
AALVVLLIAI AV
|
|---|
| |