| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1178 |
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| Symbol | upp |
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| ID | 6064905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1291876 |
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| End bp | 1292502 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641600594 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_001724172 |
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| Protein GI | 170019218 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0242269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATCG TGGAAGTCAA ACACCCACTC GTCAAACACA AGCTGGGACT GATGCGTGAG
CAAGATATCA GCACCAAGCG CTTTCGCGAA CTCGCTTCCG AAGTGGGTAG CCTGCTGACT
TACGAAGCGA CCGCCGACCT CGAAACGGAA AAAGTAACTA TCGAAGGCTG GAACGGCCCG
GTAGAAATCG ACCAGATCAA AGGTAAGAAA ATTACCGTTG TGCCAATTCT GCGTGCGGGT
CTTGGTATGA TGGACGGTGT GCTGGAAAAC GTTCCGAGCG CGCGCATCAG CGTTGTCGGT
ATGTACCGTA ATGAAGAAAC GCTGGAGCCG GTACCGTACT TCCAGAAACT GGTTTCTAAC
ATCGATGAGC GTATGGCGCT GATCGTTGAC CCAATGCTGG CAACCGGTGG TTCCGTTATC
GCGACCATCG ACCTGCTGAA AAAAGCGGGC TGCAGCAGCA TCAAAGTTCT GGTGCTGGTC
GCTGCGCCAG AAGGTATCGC TGCGCTGGAA AAAGCGCACC CGGACGTCGA ACTGTATACC
GCATCGATTG ATCAGGGACT GAACGAGCAC GGATACATTA TTCCGGGCCT CGGCGATGCC
GGTGACAAAA TCTTTGGTAC GAAATAA
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| Protein sequence | MKIVEVKHPL VKHKLGLMRE QDISTKRFRE LASEVGSLLT YEATADLETE KVTIEGWNGP
VEIDQIKGKK ITVVPILRAG LGMMDGVLEN VPSARISVVG MYRNEETLEP VPYFQKLVSN
IDERMALIVD PMLATGGSVI ATIDLLKKAG CSSIKVLVLV AAPEGIAALE KAHPDVELYT
ASIDQGLNEH GYIIPGLGDA GDKIFGTK
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