Gene EcolC_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1177 
Symbol 
ID6064917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1290514 
End bp1291551 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content53% 
IMG OID641600593 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_001724171 
Protein GI170019217 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0570522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATA AAACCTCTCT TAGCTACAAA GATGCCGGTG TTGATATTGA CGCGGGTAAT 
GCTCTGGTTG GAAGAATCAA AGGCGTAGTG AAGAAAACGC GTCGTCCGGA AGTGATGGGC
GGTCTGGGCG GCTTCGGTGC GCTGTGTGCA TTGCCGCAAA AATATCGTGA ACCCGTGCTG
GTTTCCGGCA CTGACGGCGT AGGTACCAAG CTGCGTCTGG CAATGGACTT AAAACGTCAC
GACACCATTG GTATTGATCT GGTCGCCATG TGCGTTAATG ACCTGGTGGT GCAAGGTGCA
GAGCCGCTGT TTTTCCTCGA CTATTACGCA ACCGGAAAAC TGGATGTTGA TACCGCTTCA
GCGGTGATCA GCGGTATCGC GGAAGGATGT CTGCAATCGG GCTGTTCACT GGTGGGTGGC
GAAACGGCAG AAATGCCGGG GATGTATCAC GGTGAGGATT ACGATGTCGC GGGTTTCTGC
GTTGGCGTGG TAGAAAAATC AGAAATCATC GACGGCTCTA AAGTCAGCGA CGGCGATGTG
CTGATTGCAC TCGGTTCCAG CGGTCCGCAC TCGAACGGCT ATTCGCTGGT GCGCAAAATT
CTTGAAGTCA GCGGTTGTGA TCCGCAAACC ACCGAACTTG ATGGTAAGCC ATTAGCCGAT
CATCTGCTGG CACCGACCCG CATTTACGTG AAGTCAGTGC TGGAGTTGAT TGAAAAGGTC
GATGTGCATG CCATTGCGCA CCTGACCGGC GGCGGCTTCT GGGAAAACAT TCCACGCGTA
TTGCCAGATA ATACCCAGGC AGTGATTGAT GAATCTTCCT GGCAGTGGCC GGAAGTGTTC
AACTGGCTGC AAACGGCAGG TAACGTTGAA CGCCATGAAA TGTATCGCAC CTTCAACTGC
GGCGTCGGGA TGATTATTGC CCTGCCTGCT CCGGAAGTGG ACAAAGCCCT CGCCCTGCTC
AATGCCAACG GTGAAAACGC GTGGAAAATC GGTATCATCA AAGCCTCTGA TTCCGAACAA
CGCGTGGTTA TCGAATAA
 
Protein sequence
MTDKTSLSYK DAGVDIDAGN ALVGRIKGVV KKTRRPEVMG GLGGFGALCA LPQKYREPVL 
VSGTDGVGTK LRLAMDLKRH DTIGIDLVAM CVNDLVVQGA EPLFFLDYYA TGKLDVDTAS
AVISGIAEGC LQSGCSLVGG ETAEMPGMYH GEDYDVAGFC VGVVEKSEII DGSKVSDGDV
LIALGSSGPH SNGYSLVRKI LEVSGCDPQT TELDGKPLAD HLLAPTRIYV KSVLELIEKV
DVHAIAHLTG GGFWENIPRV LPDNTQAVID ESSWQWPEVF NWLQTAGNVE RHEMYRTFNC
GVGMIIALPA PEVDKALALL NANGENAWKI GIIKASDSEQ RVVIE