| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1173 |
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| Symbol | |
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| ID | 6064994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1283811 |
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| End bp | 1286054 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641600589 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001724167 |
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| Protein GI | 170019213 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0079949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACTGA ATGCAACTTA TATAAAAATA CGTGATAAAT GGTGGGGGCT TCCGCTGTTC
CTGCCTTCTT TAATCTTGCC CATTTTCGCC CACATTAATA CTTTCGCGCA TATTTCTTCC
GGTGAGGTTT TTCTCTTTTA TCTGCCTCTG GCACTGATGA TCAGCATGAT GATGTTTTTC
AGCTGGGCGG CATTGCCAGG GATCGCCTTA GGGATTTTTG TCCGCAAATA TGCAGAGCTG
GGTTTTTACG AAACGCTATC ATTAACGGCT AATTTTATTA TCATTATCAT TCTCTGTTGG
GGCGGTTACA GGGTCTTTAC TCCCCGGCGT AACAACGTTT CACATGGTGA TACCCGTTTA
ATTTCCCAGC GTATATTCTG GCAGATTGTG TTTCCTGCAA CGCTGTTTCT GATACTTTTC
CAGTTTGCTG CATTTGTAGG ATTACTGGCG AGCAGAGAAA ATCTGGTCGG TGTCATGCCT
TTTAACCTCG GGACTTTAAT CAATTATCAG GCCTTACTGG TGGGTAATCT GATCGGTGTC
CCGCTGTGCT ACTTCATCAT TCGGGTAGTG CGAAATCCAT TTTATTTACG TAGCTATTAT
TCGCAATTAA AACAGCAGGT TGATGCCAAA GTCACCAAAA AAGAGTTCGC GCTCTGGCTA
CTGGCATTAG GTGCTTTATT GTTGCTGTTA TGCATGCCGT TAAATGAAAA AAGCACAATT
TTTAGCACCA ATTATACCTT GTCATTATTG CTGCCCCTGA TGATGTGGGG AGCGATGCGC
TATGGTTATA AGCTGATTTC GCTGCTCTGG GCGGTCGTGT TGATGATCAG CATCCACAGC
TATCAAAATT ACATTCCCAT TTATCCTGGC TATACCACGC AGCTGACCAT AACCTCCTCC
AGTTATCTGG TATTCTCTTT TATTGTCAAT TATATGGCTG TACTGGCAAC CCGTCAGAGA
GCGGTAGTCA GACGCATTCA GCGGCTTGCG TATGTGGACC CGGTGGTTCA TCTGCCAAAT
GTTCGCGCCC TGAATCGCGC GTTGCGTGAT GCCCCCTGGT CTGCGCTTTG TTATTTACGC
ATCCCTGGCA TGGAAATGCT GGTTAAGAAC TATGGCATCA TGCTGCGGAT TCAATACAAG
CAAAAACTTT CTCACTGGCT GTCACCCTTG CTGGAACCGG GTGAAGATGT TTATCAGCTT
TCGGGTAACG ATCTCGCGCT GCGACTGAAT ACAGAATCGC ACCAGGAGCG CATTACCGCA
CTGGATAGCC ATCTCAAGCA ATTTCGTTTC TTTTGGGATG GCATGCCGAT GCAACCGCAG
ATTGGCGTCA GTTACTGCTA TGTGCGCTCG CCAGTGAATC ATATCTACCT GCTGCTGGGA
GAGCTAAATA CGGTCGCCGA ACTTTCCATC GTGACCAACG CCCCGGAAAA TATGCAGCGT
CGCGGGGCAA TGTATTTGCA ACACGAATTG AAAGATAAAG TCGCGATGAT GAATCGACTA
CAGCAGGCGC TGGAACACAA CCATTTTTTC CTGATGGCCC AGCCGATTAC CGGTATGCGT
GGTGATGTTT ACCATGAAAT TCTTCTGCGC ATGAAAGGTG AGAATGATGA ACTGATCAGC
CCCGATAGCT TCTTGCCGGT CGCGCACGAA TTTGGTTTAT CGTCGAGTAT CGACATGTGG
GTCATTGAGC ATACGCTGCA ATTTATGGCT GAAAACAGAG CGAAGATGCC CGCTCACCGT
TTTGCTATTA ATCTGTCTCC AACCTCGGTA TGTCAGGCTC GTTTTCCTGT TGAAGTCAGT
CAGTTGCTGG CTAAATATCA GATTGAAGCG TGGCAACTTA TTTTTGAAGT CACCGAATGT
AATGCTCTGA CCAATGTTAA GCAGGCGCAA ATCACCTTGC AGCATCTTCA GGAATTAGGC
TGCCAGATTG CGATTGATGA TTTCGGCACC GGCTACGCCA GCTATGCACG GCTTAAAAAT
GTGAATGCCG ATCTGCTTAA AATTGACGGC AGCTTTATCC GCAATATTGT GTCAAATAGT
CTGGATTATC AGATAGTGGC GTCGATTTGC CACCTGGCGC GAATGAAGAA AATGCGGGTA
GTGGCAGAGT ACGTTGAAAA CGAAGAGATC CGCGAGGCGG TGCTCTCTTT GGGGATCGAT
TATATGCAGG GTTATCTTAT TGGTAAGCCG CAGCCGTTAA TTGATACGCT GAATGAAATC
GAACCCATTC GCGAAAGTGC CTGA
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| Protein sequence | MKLNATYIKI RDKWWGLPLF LPSLILPIFA HINTFAHISS GEVFLFYLPL ALMISMMMFF
SWAALPGIAL GIFVRKYAEL GFYETLSLTA NFIIIIILCW GGYRVFTPRR NNVSHGDTRL
ISQRIFWQIV FPATLFLILF QFAAFVGLLA SRENLVGVMP FNLGTLINYQ ALLVGNLIGV
PLCYFIIRVV RNPFYLRSYY SQLKQQVDAK VTKKEFALWL LALGALLLLL CMPLNEKSTI
FSTNYTLSLL LPLMMWGAMR YGYKLISLLW AVVLMISIHS YQNYIPIYPG YTTQLTITSS
SYLVFSFIVN YMAVLATRQR AVVRRIQRLA YVDPVVHLPN VRALNRALRD APWSALCYLR
IPGMEMLVKN YGIMLRIQYK QKLSHWLSPL LEPGEDVYQL SGNDLALRLN TESHQERITA
LDSHLKQFRF FWDGMPMQPQ IGVSYCYVRS PVNHIYLLLG ELNTVAELSI VTNAPENMQR
RGAMYLQHEL KDKVAMMNRL QQALEHNHFF LMAQPITGMR GDVYHEILLR MKGENDELIS
PDSFLPVAHE FGLSSSIDMW VIEHTLQFMA ENRAKMPAHR FAINLSPTSV CQARFPVEVS
QLLAKYQIEA WQLIFEVTEC NALTNVKQAQ ITLQHLQELG CQIAIDDFGT GYASYARLKN
VNADLLKIDG SFIRNIVSNS LDYQIVASIC HLARMKKMRV VAEYVENEEI REAVLSLGID
YMQGYLIGKP QPLIDTLNEI EPIRESA
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