| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1162 |
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| Symbol | ispG |
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| ID | 6068100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1270946 |
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| End bp | 1272064 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641600578 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001724156 |
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| Protein GI | 170019202 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.010209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATAACC AGGCTCCAAT TCAACGTAGA AAATCAACAC GTATTTACGT TGGGAATGTG
CCGATTGGCG ATGGTGCTCC CATCGCCGTA CAGTCCATGA CCAATACGCG TACGACAGAC
GTCGAAGCAA CGGTCAATCA AATCAAGGCG CTGGAACGCG TTGGCGCTGA TATCGTCCGT
GTATCCGTAC CGACGATGGA CGCGGCAGAA GCGTTCAAAC TCATCAAACA GCAGGTTAAC
GTGCCGCTGG TGGCTGACAT CCACTTCGAC TATCGCATTG CACTGAAAGT AGCGGAATAC
GGCGTCGATT GTCTGCGTAT TAACCCTGGC AATATCGGTA ATGAAGAGCG TATTCGCATG
GTGGTTGACT GTGCGCGCGA TAAAAACATT CCGATCCGTA TTGGCGTTAA CGCCGGATCG
CTGGAAAAAG ATCTGCAAGA AAAGTATGGC GAACCGACGC CGCAGGCGTT GCTGGAATCC
GCCATGCGCC ATGTTGATCA TCTCGATCGC CTGAACTTCG ATCAGTTCAA AGTCAGCGTG
AAAGCGTCTG ACGTCTTCCT CGCTGTTGAG TCTTATCGTT TGCTGGCAAA ACAGATCGAT
CAGCCGCTGC ATCTGGGGAT CACCGAAGCC GGTGGTGCAC GCAGCGGGGC AGTAAAATCC
GCCATTGGTT TAGGTCTGCT GCTGTCTGAA GGCATCGGCG ACACGCTGCG CGTATCACTG
GCGGCCGATC CGGTCGAAGA GATCAAAGTC GGTTTCGATA TTTTGAAATC GCTGCGTATC
CGTTCGCGCG GGATCAACTT CATCGCCTGC CCGACCTGTT CGCGTCAGGA ATTTGATGTT
ATCGGTACGG TTAACGCGCT GGAGCAACGC CTGGAAGATA TCATCACTCC GATGGACGTT
TCGATTATCG GCTGCGTGGT GAATGGCCCA GGTGAGGCGC TGGTTTCTAC ACTCGGCGTC
ACCGGCGGCA ACAAGAAAAG CGGCCTCTAT GAAGATGGCG TGCGCAAAGA CCGTCTGGAC
AACAACGATA TGATCGACCA GCTGGAAGCA CGCATTCGTG CGAAAGCCAG TCAGCTGGAC
GAAGCGCGTC GAATTGACGT TCAGCAGGTT GAAAAATAA
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| Protein sequence | MHNQAPIQRR KSTRIYVGNV PIGDGAPIAV QSMTNTRTTD VEATVNQIKA LERVGADIVR
VSVPTMDAAE AFKLIKQQVN VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEERIRM
VVDCARDKNI PIRIGVNAGS LEKDLQEKYG EPTPQALLES AMRHVDHLDR LNFDQFKVSV
KASDVFLAVE SYRLLAKQID QPLHLGITEA GGARSGAVKS AIGLGLLLSE GIGDTLRVSL
AADPVEEIKV GFDILKSLRI RSRGINFIAC PTCSRQEFDV IGTVNALEQR LEDIITPMDV
SIIGCVVNGP GEALVSTLGV TGGNKKSGLY EDGVRKDRLD NNDMIDQLEA RIRAKASQLD
EARRIDVQQV EK
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