Gene EcolC_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1160 
Symbol 
ID6068099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1268467 
End bp1269621 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content53% 
IMG OID641600576 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_001724154 
Protein GI170019200 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0206768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC AATTAGTCAC ACCTGAAAAC GTCACCACGA AAGATGGAAA AATCAACCTG 
CTGGATCTCA ACCGTCAGCA GATGCGGGAG TTTTTTAAAG ATTTAGGTGA AAAACCCTTC
CGCGCCGATC AGGTGATGAA GTGGATGTAT CACTATTGCT GCGACAACTT TGATGAGATG
ACCGACATCA ACAAAGTGTT GCGCGGCAAA CTGAAAGAGG TGGCGGAAAT CCGCGCACCG
GAAGTGGTTG AAGAACAGCG TTCATCCGAC GGCACCATTA AATGGGCGAT CGCCGTTGGC
GATCAGCGCG TCGAAACGGT GTATATCCCG GAAGACGACC GTGCCACGCT CTGCGTCTCT
TCGCAGGTGG GGTGTGCGCT GGAGTGTAAA TTCTGTTCCA CCGCCCAGCA GGGCTTTAAC
CGCAACCTGC GGGTATCGGA AATTATTGGC CAGGTGTGGC GTGCGGCGAA AATCGTCGGC
GCAGCAAAAG TCACCGGTCA GCGCCCGATC ACTAACGTCG TGATGATGGG TATGGGCGAG
CCGCTGCTCA ACCTGAACAA CGTCGTTCCG GCGATGGAAA TCATGTTGGA TGACTTTGGC
TTTGGTCTGT CTAAACGTCG CGTGACGCTT TCCACTTCCG GTGTAGTTCC GGCGCTGGAT
AAACTGGGCG ATATGATCGA CGTTGCACTG GCAATTTCCC TGCACGCGCC GAACGACGAA
ATTCGTGACG AAATTGTGCC GATCAACAAA AAGTACAATA TCGAAACGTT CCTTGCTGCG
GTGCGCCGTT ATCTGGAGAA ATCCAACGCC AATCAGGGCC GAGTCACTAT TGAATATGTG
ATGCTTGACC ACGTTAACGA CGGCACTGAA CACGCGCACC AACTGGCGGA ACTGCTGAAA
GATACGCCGT GTAAGATCAA CCTGATCCCG TGGAACCCGT TCCCGGGTGC GCCGTATGGA
CGCAGCTCGA ACAGCCGTAT CGACCGTTTC TCAAAAGTGC TGATGAGCTA CGGTTTCACC
ACTATTGTGC GTAAAACTCG TGGTGATGAT ATCGATGCTG CCTGTGGTCA GTTGGCGGGC
GATGTTATCG ACCGTACGAA ACGTACCCTG CGTAAACGGA TGCAGGGTGA AGCCATCGAC
ATTAAAGCGG TCTGA
 
Protein sequence
MSEQLVTPEN VTTKDGKINL LDLNRQQMRE FFKDLGEKPF RADQVMKWMY HYCCDNFDEM 
TDINKVLRGK LKEVAEIRAP EVVEEQRSSD GTIKWAIAVG DQRVETVYIP EDDRATLCVS
SQVGCALECK FCSTAQQGFN RNLRVSEIIG QVWRAAKIVG AAKVTGQRPI TNVVMMGMGE
PLLNLNNVVP AMEIMLDDFG FGLSKRRVTL STSGVVPALD KLGDMIDVAL AISLHAPNDE
IRDEIVPINK KYNIETFLAA VRRYLEKSNA NQGRVTIEYV MLDHVNDGTE HAHQLAELLK
DTPCKINLIP WNPFPGAPYG RSSNSRIDRF SKVLMSYGFT TIVRKTRGDD IDAACGQLAG
DVIDRTKRTL RKRMQGEAID IKAV