Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1160 |
Symbol | |
ID | 6068099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1268467 |
End bp | 1269621 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641600576 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_001724154 |
Protein GI | 170019200 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0206768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAC AATTAGTCAC ACCTGAAAAC GTCACCACGA AAGATGGAAA AATCAACCTG CTGGATCTCA ACCGTCAGCA GATGCGGGAG TTTTTTAAAG ATTTAGGTGA AAAACCCTTC CGCGCCGATC AGGTGATGAA GTGGATGTAT CACTATTGCT GCGACAACTT TGATGAGATG ACCGACATCA ACAAAGTGTT GCGCGGCAAA CTGAAAGAGG TGGCGGAAAT CCGCGCACCG GAAGTGGTTG AAGAACAGCG TTCATCCGAC GGCACCATTA AATGGGCGAT CGCCGTTGGC GATCAGCGCG TCGAAACGGT GTATATCCCG GAAGACGACC GTGCCACGCT CTGCGTCTCT TCGCAGGTGG GGTGTGCGCT GGAGTGTAAA TTCTGTTCCA CCGCCCAGCA GGGCTTTAAC CGCAACCTGC GGGTATCGGA AATTATTGGC CAGGTGTGGC GTGCGGCGAA AATCGTCGGC GCAGCAAAAG TCACCGGTCA GCGCCCGATC ACTAACGTCG TGATGATGGG TATGGGCGAG CCGCTGCTCA ACCTGAACAA CGTCGTTCCG GCGATGGAAA TCATGTTGGA TGACTTTGGC TTTGGTCTGT CTAAACGTCG CGTGACGCTT TCCACTTCCG GTGTAGTTCC GGCGCTGGAT AAACTGGGCG ATATGATCGA CGTTGCACTG GCAATTTCCC TGCACGCGCC GAACGACGAA ATTCGTGACG AAATTGTGCC GATCAACAAA AAGTACAATA TCGAAACGTT CCTTGCTGCG GTGCGCCGTT ATCTGGAGAA ATCCAACGCC AATCAGGGCC GAGTCACTAT TGAATATGTG ATGCTTGACC ACGTTAACGA CGGCACTGAA CACGCGCACC AACTGGCGGA ACTGCTGAAA GATACGCCGT GTAAGATCAA CCTGATCCCG TGGAACCCGT TCCCGGGTGC GCCGTATGGA CGCAGCTCGA ACAGCCGTAT CGACCGTTTC TCAAAAGTGC TGATGAGCTA CGGTTTCACC ACTATTGTGC GTAAAACTCG TGGTGATGAT ATCGATGCTG CCTGTGGTCA GTTGGCGGGC GATGTTATCG ACCGTACGAA ACGTACCCTG CGTAAACGGA TGCAGGGTGA AGCCATCGAC ATTAAAGCGG TCTGA
|
Protein sequence | MSEQLVTPEN VTTKDGKINL LDLNRQQMRE FFKDLGEKPF RADQVMKWMY HYCCDNFDEM TDINKVLRGK LKEVAEIRAP EVVEEQRSSD GTIKWAIAVG DQRVETVYIP EDDRATLCVS SQVGCALECK FCSTAQQGFN RNLRVSEIIG QVWRAAKIVG AAKVTGQRPI TNVVMMGMGE PLLNLNNVVP AMEIMLDDFG FGLSKRRVTL STSGVVPALD KLGDMIDVAL AISLHAPNDE IRDEIVPINK KYNIETFLAA VRRYLEKSNA NQGRVTIEYV MLDHVNDGTE HAHQLAELLK DTPCKINLIP WNPFPGAPYG RSSNSRIDRF SKVLMSYGFT TIVRKTRGDD IDAACGQLAG DVIDRTKRTL RKRMQGEAID IKAV
|
| |