Gene EcolC_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1148 
Symbol 
ID6068060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1252581 
End bp1252967 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content50% 
IMG OID641600564 
Productscaffold protein 
Protein accessionYP_001724142 
Protein GI170019188 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0205414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACA GCGAAAAAGT TATCGACCAT TACGAGAATC CGCGTAACGT GGGTTCCTTT 
GACAACAACG ACGAGAACGT CGGCAGCGGC ATGGTGGGTG CACCGGCCTG TGGCGACGTG
ATGAAGTTGC AGATTAAAGT CAACGATGAA GGTATCATTG AAGACGCGCG TTTTAAAACT
TACGGCTGCG GTTCCGCTAT CGCTTCCAGC TCCCTGGTCA CCGAATGGGT GAAAGGGAAG
TCTCTCGACG AAGCGCAGGC GATCAAAAAC ACCGATATTG CTGAAGAACT TGAACTGCCG
CCGGTGAAAA TTCACTGTTC TATTCTGGCA GAAGACGCGA TCAAAGCCGC CATTGCGGAC
TATAAAAGCA AACGTGAAGC AAAATAA
 
Protein sequence
MAYSEKVIDH YENPRNVGSF DNNDENVGSG MVGAPACGDV MKLQIKVNDE GIIEDARFKT 
YGCGSAIASS SLVTEWVKGK SLDEAQAIKN TDIAEELELP PVKIHCSILA EDAIKAAIAD
YKSKREAK