| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1146 |
|---|
| Symbol | |
|---|
| ID | 6065655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1250610 |
|---|
| End bp | 1251098 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641600562 |
|---|
| Product | DNA-binding transcriptional regulator IscR |
|---|
| Protein accession | YP_001724140 |
|---|
| Protein GI | 170019186 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0117595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGA CATCTAAAGG GCGCTATGCC GTGACCGCAA TGCTTGACGT TGCGCTCAAC
TCTGAAGCGG GCCCGGTACC GTTGGCTGAT ATTTCCGAAC GTCAGGGAAT TTCCCTTTCT
TATCTGGAAC AACTGTTTTC CCGTCTGCGT AAAAATGGTC TGGTTTCCAG CGTACGTGGA
CCAGGCGGTG GTTATCTGTT AGGCAAAGAT GCCAGCAGCA TCGCCGTTGG CGAAGTGATT
AGCGCCGTTG ACGAATCTGT AGATGCTACT CGTTGTCAGG GTAAAGGCGG CTGCCAGGGC
GGTGATAAAT GCCTGACCCA CGCGCTGTGG CGTGATTTGA GCGACCGTCT CACCGGTTTT
CTCAACAACA TTACTTTAGG CGAACTGGTT AATAACCAGG AAGTGCTGGA TGTGTCTGGT
CGTCAGCATA CTCACGACGC GCCACGCACC CGCATACAAG ACGCGATCGA CGTTAAGTTA
CGCGCTTAA
|
|---|
| Protein sequence | MRLTSKGRYA VTAMLDVALN SEAGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVSSVRG
PGGGYLLGKD ASSIAVGEVI SAVDESVDAT RCQGKGGCQG GDKCLTHALW RDLSDRLTGF
LNNITLGELV NNQEVLDVSG RQHTHDAPRT RIQDAIDVKL RA
|
|---|
| |