Gene EcolC_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1138 
Symbol 
ID6067174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1242015 
End bp1242533 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content52% 
IMG OID641600554 
Product3-phenylpropionate dioxygenase subunit beta 
Protein accessionYP_001724132 
Protein GI170019178 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC AAGTTTCACT GGAGTTACAT CACCGCATTA GCCAGTTTCT CTTTCACGAA 
GCCAGTCTGC TGGATGACTG GAAATTTCGT GACTGGCTGG CACAGCTCGA CGAAGAGATT
CGTTACACCA TGCGCACCAC GGTTAACGCG CAAACGCGCG ACCGCCGCAA AGGCGTTCAG
CCACCGACGA CCTGGATTTT TAATGACACC AAAGACCAGC TGGAGCGGCG AATCGCCCGT
CTGGAAACGG GCATGGCCTG GGCAGAAGAG CCGCCGTCAC GCACTCGTCA CTTAATCAGC
AACTGCCAGG TAAGCGAAAC CGACATCCCA AATGTATTTG CCGTGAGGGT GAATTATCTA
CTTTATCGGG CACAAAAAGA GCGCGATGAA ACATTCTATG TTGGAACGCG TTTCGACAAA
GTTCGCCGTC TGGAAGATGA CAACTGGCGC TTGCTGGAAC GGGATATCGT CCTGGATCAA
GCGGTAATCA CTTCCCATAA CCTGAGTGTA CTGTTCTGA
 
Protein sequence
MSAQVSLELH HRISQFLFHE ASLLDDWKFR DWLAQLDEEI RYTMRTTVNA QTRDRRKGVQ 
PPTTWIFNDT KDQLERRIAR LETGMAWAEE PPSRTRHLIS NCQVSETDIP NVFAVRVNYL
LYRAQKERDE TFYVGTRFDK VRRLEDDNWR LLERDIVLDQ AVITSHNLSV LF