Gene EcolC_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1136 
Symbol 
ID6068039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1240886 
End bp1241698 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content56% 
IMG OID641600552 
Product2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 
Protein accessionYP_001724130 
Protein GI170019176 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC TGCATAACGA GTCCATTTTT ATTACCGGCG GCGGATCGGG ATTAGGGCTG 
GCGCTGGTCG AGCGATTTAT CGAAGAAGGC GCGCAGGTTG CCACGCTGGA ACTGTCGGCG
GCAAAAGTCG CCAGTCTGCG TCAGCGATTT GGCGAACATA TTCTGGCGGT GGAAGGTAAC
GTGACCTGTT ATGCCGATTA TCAACGCGCG GTCGATCAGA TCCTGACTCG TTCCGGCAAG
CTGGATTGTT TTATCGGCAA TGCAGGCATC TGGGATCACA ATGCCTCACT GGTTAATACT
CCCGCAGAGA CGCTCGAAAC CGGCTTCCAC GAGCTGTTTA ACGTCAACGT ACTCGGTTAC
CTGCTGGGCG CAAAAGCCTG CGCTCCGGCG TTAATCGCCA GTGAAGGCAG CATGATTTTC
ACACTGTCAA ATGCCGCCTG GTATCCTGGC GGCGGTGGCC CGCTGTACAC CGCCAGTAAA
CATGCCGCAA CCGGACTTAT TCGCCAACTG GCTTATGAAC TGGCACCGAA AGTGCGGGTG
AATGGCGTCG GCCCGTGTGG TATGGCCAGC GACCTGCGCG GCCCACAGGC GCTCGGGCAA
AGTGAAACCT CGATAATGCA GTCTCTGACG CCGGAGAAAA TTGCCGCCAT TTTACCGCTG
CAATTTTTCC CGCAACCGGC GGATTTTACG GGGCCGTATG TGATGTTGGC ATCGCGGCGC
AATAATCGCG CATTAAGCGG TGTGATGATC AACGCTGATG CGGGTTTAGC GATTCGCGGC
ATTCGCCACG TAGCGGCTGG GCTGGATCTT TAA
 
Protein sequence
MSDLHNESIF ITGGGSGLGL ALVERFIEEG AQVATLELSA AKVASLRQRF GEHILAVEGN 
VTCYADYQRA VDQILTRSGK LDCFIGNAGI WDHNASLVNT PAETLETGFH ELFNVNVLGY
LLGAKACAPA LIASEGSMIF TLSNAAWYPG GGGPLYTASK HAATGLIRQL AYELAPKVRV
NGVGPCGMAS DLRGPQALGQ SETSIMQSLT PEKIAAILPL QFFPQPADFT GPYVMLASRR
NNRALSGVMI NADAGLAIRG IRHVAAGLDL