Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1129 |
Symbol | |
ID | 6068007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1233556 |
End bp | 1234539 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641600545 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001724123 |
Protein GI | 170019169 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAA AAATGAGAAC AACCCGTAAT CTATTATTAA TGGCTACGCT ATTAGGTAGC GCACTATTTG CCAGGGCTGC GGATAAAGAA ATGACCATTG GTGCAATATA CCTTGATACC CAGGGATATT ACGCTGGAGT GCGTCAGGGC GTTCAGGATG CGGCAAAAGA TTCTTCAGTA CAGGTACAGT TAATTGAAAC TAACGCCCAG GGTGATATTT CGAAAGAAAG TACCTTTGTT GATACCCTCG TGGCGCGTAA TGTCGATGCC ATTATTTTAT CGGCAGTGTC TGAAAATGGC AGTAGCCGTA CCGTTCGTCG CGCCAGTGAA GCGGGTATTC CGGTGATTTG CTACAACACC TGTATTAATC AAAAGGGTGT CGATAAATAT GTCTCGGCGT ATCTGGTCGG CGATCCACTG GAATTTGGTA AAAAACTGGG TAACGCTGCC GCCGATTATT TTATTGCCAA TAAAATTGAC CAGCCGAAAA TTGCCGTCAT CAATTGCGAA GCCTTTGAAG TTTGTGTGCA GCGACGTAAA GGATTTGAAG AAGTATTAAA ATCCCGCGTT CCCGGCGCGC AAATTGTCGC TAATCAGGAA GGGACTGTTT TAGATAAAGC GATTTCCGTT GGTGAAAAAC TGATTATCTC CACGCCGGAT CTCAACGCCA TTATGGGGGA GTCGGGCGGT GCGACACTCG GCGCGGTAAA AGCGGTACGT AATCAAAATC AGGCCGGAAA AATTGCTGTT TTCGGTTCGG ATATGACAAC CGAAATTGCT CAGGAGCTGG AAAACAATCA GGTGCTGAAA GCGGTAGTGG ATATTTCCGG TAAGAAAATG GGCAATGCTG TTTTCGCGCA AACATTGAAG GTTATCAATA AACAAGCCGA CGGTGAAAAA GTGATTCAGG TGCCAATCGA TCTCTATACC AAAACGGAAG ATGGTAAACA GTGGCTGGCA ACGCACGTTG ATGGTCTGCC CTAA
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Protein sequence | MPKKMRTTRN LLLMATLLGS ALFARAADKE MTIGAIYLDT QGYYAGVRQG VQDAAKDSSV QVQLIETNAQ GDISKESTFV DTLVARNVDA IILSAVSENG SSRTVRRASE AGIPVICYNT CINQKGVDKY VSAYLVGDPL EFGKKLGNAA ADYFIANKID QPKIAVINCE AFEVCVQRRK GFEEVLKSRV PGAQIVANQE GTVLDKAISV GEKLIISTPD LNAIMGESGG ATLGAVKAVR NQNQAGKIAV FGSDMTTEIA QELENNQVLK AVVDISGKKM GNAVFAQTLK VINKQADGEK VIQVPIDLYT KTEDGKQWLA THVDGLP
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