Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1126 |
Symbol | glyA |
ID | 6067996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1227416 |
End bp | 1228669 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641600542 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001724120 |
Protein GI | 170019166 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAGC GTGAAATGAA CATTGCCGAT TATGATGCCG AACTGTGGCA GGCTATGGAG CAGGAAAAAG TACGTCAGGA AGAGCACATC GAACTGATCG CCTCCGAAAA CTACACCAGC CCGCGCGTAA TGCAGGCGCA GGGTTCTCAG CTGACCAACA AATATGCTGA AGGTTATCCG GGCAAACGCT ACTACGGCGG TTGCGAGTAT GTTGATATCG TTGAACAACT GGCGATCGAT CGTGCGAAAG AACTGTTCGG CGCTGACTAC GCTAACGTCC AGCCGCACTC CGGCTCCCAG GCTAACTTTG CGGTCTACAC CGCGCTGCTG GAACCAGGTG ATACCGTTCT GGGTATGAAC CTGGCGCATG GCGGTCACCT GACTCACGGT TCTCCGGTTA ACTTCTCCGG TAAACTGTAC AACATCGTTC CTTACGGTAT CGATGCTACC GGTCATATCG ACTACGCCGA TCTGGAAAAA CAAGCCAAAG AACACAAGCC GAAAATGATT ATCGGTGGTT TCTCTGCATA TTCCGGCGTG GTGGACTGGG CGAAAATGCG TGAAATCGCT GACAGCATCG GTGCTTACCT GTTCGTTGAT ATGGCGCACG TTGCGGGCCT GGTTGCTGCT GGCGTCTACC CGAACCCGGT TCCTCATGCT CACGTTGTTA CTACCACCAC TCACAAAACC CTGGCGGGTC CGCGCGGCGG CCTGATCCTG GCGAAAGGTG GTAGCGAAGA GCTGTACAAA AAACTGAACT CTGCCGTTTT CCCTGGTGGT CAGGGCGGTC CGTTGATGCA CGTAATCGCC GGTAAAGCGG TTGCTCTGAA AGAAGCGATG GAGCCTGAGT TCAAAACTTA CCAGCAGCAG GTCGCTAAAA ACGCTAAAGC GATGGTAGAA GTGTTCCTCG AGCGCGGCTA CAAAGTGGTT TCCGGCGGCA CTGATAACCA CCTGTTCCTG GTTGATCTGG TTGATAAAAA CCTGACCGGT AAAGAAGCAG ACGCCGCTCT GGGCCGTGCT AACATCACCG TCAACAAAAA CAGCGTACCG AACGATCCGA AGAGCCCGTT TGTGACCTCC GGTATTCGTG TAGGTACTCC GGCGATTACC CGTCGCGGCT TTAAAGAAGC CGAAGCGAAA GAACTGGCTG GCTGGATGTG TGACGTGCTG GACAGCATCA ATGATGAAGC CGTTATCGAG CGCATCAAAG GTAAAGTTCT CGACATCTGC GCACGTTACC CGGTTTACGC ATAA
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Protein sequence | MLKREMNIAD YDAELWQAME QEKVRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP GKRYYGGCEY VDIVEQLAID RAKELFGADY ANVQPHSGSQ ANFAVYTALL EPGDTVLGMN LAHGGHLTHG SPVNFSGKLY NIVPYGIDAT GHIDYADLEK QAKEHKPKMI IGGFSAYSGV VDWAKMREIA DSIGAYLFVD MAHVAGLVAA GVYPNPVPHA HVVTTTTHKT LAGPRGGLIL AKGGSEELYK KLNSAVFPGG QGGPLMHVIA GKAVALKEAM EPEFKTYQQQ VAKNAKAMVE VFLERGYKVV SGGTDNHLFL VDLVDKNLTG KEADAALGRA NITVNKNSVP NDPKSPFVTS GIRVGTPAIT RRGFKEAEAK ELAGWMCDVL DSINDEAVIE RIKGKVLDIC ARYPVYA
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