Gene EcolC_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1121 
Symbol 
ID6067978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1221825 
End bp1223252 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content53% 
IMG OID641600537 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001724115 
Protein GI170019161 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGCT GGCCCGTTTT TCCCCGCTCA TTACGACAAC TGGTAATGCT GGCATTTTTG 
CTGATTCTGC TGCCCCTGTT GGTGCTGGCA TGGCAAGCCT GGCAAAGCCT GAATGCGCTT
AGCGATCAGG CGGCGCTGGT TAACCGCACT ACGCTTATTG ATGCCCGGCG CAGTGAAGCG
ATGACCAACG CGGCGCTGGA GATGGAGCGT AGTTACCGTC AGTATTGCGT GCTGGACGAC
CCAACCCTGG CGAAGGTTTA TCAAAGCCAG CGCAAGCGTT ACAGCGAAAT GCTCGATGCC
CACGCAGGCG TGCTGCCGGA CGATAAACTC TACCAGGCAT TACGTCAGGA TTTGCACAAT
CTGGCTCAAC TTCAGTGTAA CAACAGCGGT CCCGATGCTG CCGCCGCCGC ACGTCTTGAA
GCCTTTGCCA GTGCCAATAC CGAAATGGTA CAGGCCACGC GCACAGTGGT GTTCTCTCGT
GGGCAGCAGC TTCAGCGTGA AATCGCCGAA CGTGGGCAAT ATTTTGGTTG GCAATCGCTG
GTGCTATTTC TGGTGAGTCT GGTAATGGTA CTGCTTTTCA CGCGGATGAT TATCGGGCCG
GTGAAAAATA TCGAGCGCAT GATCAACCGT CTGGGGGAAG GGCGTTCTCT GGGCAATAGC
GTCTCGTTCA GTGGACCGAG CGAGTTACGC TCGGTTGGGC AACGTATTCT TTGGTTAAGT
GAGCGCCTGT CATGGCTGGA ATCCCAACGC CATCAATTTT TAAGACATTT ATCTCATGAA
TTAAAAACGC CACTGGCGAG TATGCGCGAG GGCACTGAAT TACTGGCTGA CCAGGTTGTC
GGGCCGCTTA CGCCAGAGCA AAAAGAGGTG GTGAGCATTC TTGATAGCAG CAGCCGCAAT
TTGCAAAAAC TGATCGAACA ACTGCTTGAT TACAACCGTA AACAGGCGGA CAGTGCGGTG
GAACTGGAGA ATGTTGAGTT AGCACCGCTG GTGGAGACAG TGGTTTCTGC TCATAGCCTG
CCCGCACGGG CTAAAATGAT GCATACCGAC GTCGATCTCA AAGCAACAGC TTGCCTGGCG
GAGCCAATGC TGCTGATGAG CGTACTGGAT AATCTTTACT CCAATGCGGT GCACTACGGG
GCTGAATCCG GTAACATTTG CCTTCGCAGC AGTTTACATG GTGCGCGGGT TTATATTGAT
GTCATCAATA CAGGCACGCC CATTCCGCAA GAGGAACGCG CCATGATCTT CGAACCCTTT
TTTCAGGGAA GCCACCAGCG AAAAGGGGCG GTGAAGGGCA GCGGTCTGGG ATTAAGCATT
GCCAGGGATT GTATTCGCCG TATGCAAGGG GAACTGTATC TGGTCGACGA GAGCGGGCAA
GACGTTTGTT TCCGCATTGA ATTACCGTCG TCGAAAAACA CGAAATAA
 
Protein sequence
MKRWPVFPRS LRQLVMLAFL LILLPLLVLA WQAWQSLNAL SDQAALVNRT TLIDARRSEA 
MTNAALEMER SYRQYCVLDD PTLAKVYQSQ RKRYSEMLDA HAGVLPDDKL YQALRQDLHN
LAQLQCNNSG PDAAAAARLE AFASANTEMV QATRTVVFSR GQQLQREIAE RGQYFGWQSL
VLFLVSLVMV LLFTRMIIGP VKNIERMINR LGEGRSLGNS VSFSGPSELR SVGQRILWLS
ERLSWLESQR HQFLRHLSHE LKTPLASMRE GTELLADQVV GPLTPEQKEV VSILDSSSRN
LQKLIEQLLD YNRKQADSAV ELENVELAPL VETVVSAHSL PARAKMMHTD VDLKATACLA
EPMLLMSVLD NLYSNAVHYG AESGNICLRS SLHGARVYID VINTGTPIPQ EERAMIFEPF
FQGSHQRKGA VKGSGLGLSI ARDCIRRMQG ELYLVDESGQ DVCFRIELPS SKNTK