Gene EcolC_1110 details

Gene Information

• Locus tag: EcolC_1110
• Symbol: rnc
• ID: 6065398
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli ATCC 8739
• Kingdom: Bacteria
• Replicon accession: NC_010468
• Strand: +
• Start bp: 1208860
• End bp: 1209540
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641600526
• Product: ribonuclease III
• Protein accession: YP_001724104
• Protein GI: 170019150
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.506107
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCCCA TCGTAATTAA TCGGCTTCAA CGGAAGCTGG GCTACACTTT TAATCATCAG 
GAACTGTTGC AGCAGGCATT AACTCATCGT AGTGCCAGCA GTAAACATAA CGAGCGTTTA 
GAATTTTTAG GCGACTCTAT TCTGAGCTAC GTTATCGCCA ATGCGCTTTA TCACCGTTTC 
CCTCGTGTGG ATGAAGGCGA TATGAGCCGG ATGCGCGCCA CGCTGGTCCG TGGCAATACG 
CTGGCGGAAC TGGCGCGCGA ATTTGAGTTA GGCGAGTGCT TACGTTTAGG GCCAGGTGAA 
CTTAAAAGCG GTGGATTTCG TCGTGAGTCA ATTCTCGCCG ACACCGTCGA AGCATTAATT 
GGTGGCGTAT TCCTCGACAG TGATATTCAA ACCGTCGAGA AATTAATCCT CAACTGGTAT 
CAAACTCGTT TGGACGAAAT TAGCCCAGGC GATAAACAAA AAGATCCGAA AACGCGCTTG 
CAAGAATATT TGCAGGGTCG CCATCTGCCG CTGCCGACTT ATCTGGTAGT CCAGGTACGT 
GGCGAAGCGC ACGATCAGGA ATTTACTATC CACTGCCAGG TCAGCGGCCT GAGTGAACCG 
GTGGTTGGCA CAGGTTCAAG CCGTCGTAAG GCTGAGCAGG CTGCCGCCGA ACAGGCGTTG 
AAAAAACTGG AGCTGGAATG A 

 

Protein sequence

MNPIVINRLQ RKLGYTFNHQ ELLQQALTHR SASSKHNERL EFLGDSILSY VIANALYHRF 
PRVDEGDMSR MRATLVRGNT LAELAREFEL GECLRLGPGE LKSGGFRRES ILADTVEALI 
GGVFLDSDIQ TVEKLILNWY QTRLDEISPG DKQKDPKTRL QEYLQGRHLP LPTYLVVQVR 
GEAHDQEFTI HCQVSGLSEP VVGTGSSRRK AEQAAAEQAL KKLELE