Gene EcolC_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1109 
Symbol 
ID6067912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1207614 
End bp1208588 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content52% 
IMG OID641600525 
Productsignal peptidase I 
Protein accessionYP_001724103 
Protein GI170019149 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.700104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATA TGTTTGCCCT GATTCTGGTG ATTGCCACAC TGGTGACGGG CATTTTATGG 
TGCGTGGATA AATTCTTTTT CGCACCTAAA CGGCGGGAAC GTCAGGCAGC GGCGCAGGCG
GCTGCCGGGG ACTCACTGGA TAAAGCAACG TTGAAAAAGG TTGCGCCGAA GCCTGGCTGG
CTGGAAACCG GTGCTTCTGT TTTTCCGGTA CTGGCTATCG TATTGATTGT GCGTTCGTTT
ATTTATGAAC CGTTCCAGAT CCCGTCAGGT TCGATGATGC CGACTCTGTT AATTGGTGAT
TTTATTCTGG TAGAGAAGTT TGCTTATGGC ATTAAAGATC CTATCTACCA GAAAACGCTG
ATCGAAACCG GTCATCCGAA ACGCGGCGAT ATCGTGGTCT TTAAATATCC GGAAGATCCA
AAGCTTGATT ACATCAAGCG CGCGGTGGGT TTACCGGGCG ATAAAGTCAC TTACGATCCG
GTCTCAAAAG AGCTGACGAT TCAACCGGGA TGCAGTTCCG GCCAGGCGTG TGAAAACGCG
CTGCCGGTCA CCTACTCAAA CGTGGAACCG AGCGATTTCG TTCAGACCTT CTCACGCCGT
AATGGTGGGG AAGCGACCAG CGGATTCTTT GAAGTGCCGA AAAACGAAAC CAAAGAAAAT
GGAATTCGTC TTTCCGAGCG TAAAGAGACA CTGGGTGATG TGACGCACCG CATTCTGACA
GTGCCGATTG CGCAGGATCA GGTGGGGATG TATTACCAGC AGCCAGGGCA ACAACTGGCA
ACCTGGATTG TTCCTCCGGG ACAATACTTC ATGATGGGCG ACAACCGCGA CAACAGCGCG
GACAGCCGTT ACTGGGGCTT TGTGCCGGAA GCGAATCTGG TCGGTCGGGC AACGGCTATC
TGGATGAGCT TCGATAAGCA AGAAGGCGAA TGGCCGACTG GTCTGCGCTT AAGTCGCATT
GGCGGCATCC ATTAA
 
Protein sequence
MANMFALILV IATLVTGILW CVDKFFFAPK RRERQAAAQA AAGDSLDKAT LKKVAPKPGW 
LETGASVFPV LAIVLIVRSF IYEPFQIPSG SMMPTLLIGD FILVEKFAYG IKDPIYQKTL
IETGHPKRGD IVVFKYPEDP KLDYIKRAVG LPGDKVTYDP VSKELTIQPG CSSGQACENA
LPVTYSNVEP SDFVQTFSRR NGGEATSGFF EVPKNETKEN GIRLSERKET LGDVTHRILT
VPIAQDQVGM YYQQPGQQLA TWIVPPGQYF MMGDNRDNSA DSRYWGFVPE ANLVGRATAI
WMSFDKQEGE WPTGLRLSRI GGIH