Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1104 |
Symbol | |
ID | 6065230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1202911 |
End bp | 1203486 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641600520 |
Product | RNA polymerase sigma factor RpoE |
Protein accession | YP_001724098 |
Protein GI | 170019144 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.451168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.962862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC AGTTAACGGA CCAGGTCCTG GTTGAACGGG TCCAGAAGGG AGATCAGAAA GCCTTTAACT TACTGGTAGT GCGCTATCAG CATAAAGTGG CGAGTCTGGT TTCCCGCTAT GTGCCGTCGG GTGATGTTCC CGATGTGGTA CAAGAAGCTT TTATTAAAGC CTATCGTGCG CTGGATTCGT TCCGGGGAGA TAGCGCTTTT TATACATGGC TGTATCGGAT TGCTGTAAAT ACAGCGAAAA ATTACCTGGT TGCTCAGGGG CGTCGTCCAC CTTCCAGTGA TGTGGATGCC ATTGAAGCTG AAAACTTCGA AAGTGGCGGC GCGTTGAAAG AAATTTCGAA CCCTGAGAAC TTAATGTTGT CAGAAGAACT GAGACAGATA GTTTTCCGAA CTATTGAGTC CCTCCCGGAA GATTTACGCA TGGCAATAAC CTTGCGGGAG CTGGATGGCC TGAGCTATGA AGAGATAGCC GCTATCATGG ATTGTCCGGT AGGTACGGTG CGTTCACGTA TCTTCCGAGC GAGGGAAGCT ATTGATAACA AAGTTCAACC GCTTATCAGG CGTTGA
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Protein sequence | MSEQLTDQVL VERVQKGDQK AFNLLVVRYQ HKVASLVSRY VPSGDVPDVV QEAFIKAYRA LDSFRGDSAF YTWLYRIAVN TAKNYLVAQG RRPPSSDVDA IEAENFESGG ALKEISNPEN LMLSEELRQI VFRTIESLPE DLRMAITLRE LDGLSYEEIA AIMDCPVGTV RSRIFRAREA IDNKVQPLIR R
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