Gene EcolC_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1082 
Symbol 
ID6065529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1171754 
End bp1172824 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content52% 
IMG OID641600494 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001724076 
Protein GI170019122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0673858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00039 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAAAG ACGCGCTGAA TAACGTACAT ATTACCGACG AACAGGTTTT AATGACTCCG 
GAACAACTGA AGGCCGCTTT TCCATTGAGC CTGCAACAAG AAGCCCAGAT TGCTGACTCG
CGTAAAACCA TTTCAGATAT TATCGCCGGG CGCGATCCTC GTCTGCTGGT AGTATGTGGT
CCTTGTTCCA TTCATGATCC GGAAACTGCT CTGGAATATG CTCGTCGATT TAAAGCCCTT
GCCGCAGAGG TCAGCGATAG CCTCTATCTG GTAATGCGCG TCTATTTTGA AAAACCCCGT
ACCACTGTCG GCTGGAAAGG GTTAATTAAC GATCCCCATA TGGATGGCTC TTTTGATGTA
GAAGCCGGGC TGCAGATCGC GCGTAAATTG CTGCTTGAGC TGGTGAATAT GGGACTGCCA
CTGGCGACGG AAGCGTTAGA TCCGAATAGC CCGCAATACC TGGGCGATCT GTTTAGCTGG
TCAGCAATTG GTGCTCGTAC AACGGAATCG CAAACTCACC GTGAAATGGC CTCCGGGCTT
TCCATGCCGG TTGGTTTTAA AAACGGCACC GACGGCAGTC TGGCAACAGC AATTAACGCT
ATGCGCGCCG CCGCCCAGCC GCACCGTTTT GTTGGCATTA ACCAGGCAGG GCAGGTTGCG
TTGCTACAAA CTCAGGGGAA TCCGGACGGC CATGTGATCC TGCGCGGTGG TAAAGCGCCG
AACTATAGCC CTGCGGATGT TGCGCAATGT GAAAAAGAGA TGGAACAGGC GGGACTGCGC
CCGTCTCTGA TGGTAGATTG CAGCCACGGT AATTCCAATA AAGATTATCG CCGTCAGCCT
GCGGTGGCAG AATCCGTGGT TGCTCAAATC AAAGATGGCA ATCGCTCAAT TATTGGTCTG
ATGATCGAAA GTAATATCCA CGAGGGCAAT CAGTCTTCCG AGCAACCGCG CAGTGAAATG
AAATACGGTG TATCCGTAAC CGATGCCTGC ATTAGCTGGG AAATGACCGA TGCCTTGCTG
CGTGAAATTC ATCAGGATCT GAACGGGCAG CTGACGGCTC GCGTGGCTTA A
 
Protein sequence
MQKDALNNVH ITDEQVLMTP EQLKAAFPLS LQQEAQIADS RKTISDIIAG RDPRLLVVCG 
PCSIHDPETA LEYARRFKAL AAEVSDSLYL VMRVYFEKPR TTVGWKGLIN DPHMDGSFDV
EAGLQIARKL LLELVNMGLP LATEALDPNS PQYLGDLFSW SAIGARTTES QTHREMASGL
SMPVGFKNGT DGSLATAINA MRAAAQPHRF VGINQAGQVA LLQTQGNPDG HVILRGGKAP
NYSPADVAQC EKEMEQAGLR PSLMVDCSHG NSNKDYRRQP AVAESVVAQI KDGNRSIIGL
MIESNIHEGN QSSEQPRSEM KYGVSVTDAC ISWEMTDALL REIHQDLNGQ LTARVA