Gene EcolC_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1011 
Symbol 
ID6067506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1098487 
End bp1099572 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content55% 
IMG OID641600419 
Productmurein hydrolase B 
Protein accessionYP_001724007 
Protein GI170019053 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000289241 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTTCAAGC GTCGTTATGT AACATTGCTT CCCCTTTTTG TGTTGCTTGC CGCCTGTAGC 
AGCAAGCCAA AACCTACTGA GACTGATACG ACCACCGGAA CGCCGTCTGG CGGCTTCCTG
CTTGAGCCGC AGCACAATGT GATGCAGATG GGCGGCGATT TCGCTAATAA CCCGAATGCC
CAGCAGTTCA TCGACAGAAT GGTGAACAAA CACGGTTTCG ATCGTCAGCA GTTGCAGGAA
ATTCTCTCCC AGGCGAAGCG TCTGGATTCG GTACTGCGGC TGATGGATAA CCAGGCACCA
ACCACATCGG TGAAACCGCC ATCAGGTCCG AACGGCGCAT GGCTCCGTTA TCGCAAAAAA
TTTATTACGC CGGACAACGT GCAGAACGGT GTGGTTTTCT GGAATCAGTA TGAAGATGCG
TTGAATCGCG CGTGGCAGGT GTATGGAGTA CCGCCGGAAA TTATCGTCGG GATTATCGGC
GTTGAAACCC GCTGGGGGCG CGTGATGGGG AAAACTCGCA TCCTCGATGC GCTGGCAACG
CTGTCATTTA ACTACCCACG CCGCGCGGAG TATTTCTCTG GCGAGCTGGA AACCTTCCTG
TTGATGGCGC GCGACGAGCA GGACGATCCG CTCAATCTGA AAGGTTCCTT TGCCGGGGCG
ATGGGCTACG GACAGTTTAT GCCGTCGTCT TACAAACAAT ATGCGGTAGA TTTCAGCGGC
GACGGGCATA TCAACCTGTG GGATCCGGTT GATGCGATCG GTAGCGTGGC GAACTATTTC
AAAGCGCACG GCTGGGTGAA AGGCGATCAG GTCGCGGTAA TGGCAAACGG TCAGGCTCCA
GGCTTGCCAA ATGGCTTCAA AACTAAGTAC AGCATTTCGC AGCTTGCCGC CGCAGGTTTA
ACGCCACAGC AGCCGCTGGG CAACCATCAA CAAGCCAGCC TGCTGCGTCT GGATGTTGGC
ACCGGCTACC AGTACTGGTA CGGTCTGCCG AACTTCTACA CCATCACCCG TTACAACCAC
AGCACCCATT ACGCAATGGC GGTCTGGCAG TTAGGACAAG CCGTGGCGCT GGCGCGAGTA
CAGTAG
 
Protein sequence
MFKRRYVTLL PLFVLLAACS SKPKPTETDT TTGTPSGGFL LEPQHNVMQM GGDFANNPNA 
QQFIDRMVNK HGFDRQQLQE ILSQAKRLDS VLRLMDNQAP TTSVKPPSGP NGAWLRYRKK
FITPDNVQNG VVFWNQYEDA LNRAWQVYGV PPEIIVGIIG VETRWGRVMG KTRILDALAT
LSFNYPRRAE YFSGELETFL LMARDEQDDP LNLKGSFAGA MGYGQFMPSS YKQYAVDFSG
DGHINLWDPV DAIGSVANYF KAHGWVKGDQ VAVMANGQAP GLPNGFKTKY SISQLAAAGL
TPQQPLGNHQ QASLLRLDVG TGYQYWYGLP NFYTITRYNH STHYAMAVWQ LGQAVALARV
Q