Gene EcolC_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1004 
SymbolgutQ 
ID6067627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1093284 
End bp1094249 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID641600412 
ProductD-arabinose 5-phosphate isomerase 
Protein accessionYP_001724000 
Protein GI170019046 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000464147 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000496759 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAG CACTACTGAA CGCGGGACGT CAGACGTTAA TGCTGGAGTT GCAGGAAGCA 
AGCCGTTTAC CGGAACGTCT GGGCGATGAT TTTGTTCGCG CCGCCAATAT CATCCTGCAC
TGCGAAGGCA AAGTGGTGGT TTCGGGAATT GGCAAATCGG GCCACATTGG TAAGAAAATC
GCCGCAACAC TTGCCAGTAC CGGCACACCG GCTTTTTTTG TCCATCCGGC AGAAGCACTG
CACGGCGATC TGGGGATGAT TGAAAGCCGC GATGTGATGC TGTTTATCTC TTACTCCGGT
GGCGCGAAGG AACTGGATCT GATTATTCCG CGTCTGGAAG ATAAATCTAT CGCGCTGCTG
GCGATGACCG GCAAACCGAC GTCACCGCTG GGCCTGGCGG CAAAAGCGGT GCTGGATATC
TCCGTAGAAC GCGAAGCCTG CCCGATGCAC CTTGCGCCGA CCTCCAGCAC CGTCAATACC
CTGATGATGG GTGACGCGCT GGCGATGGCG GTCATGCAGG CGCGCGGATT TAATGAAGAA
GATTTTGCCC GCTCCCACCC AGCCGGGGCA CTGGGCGCTC GCTTGCTGAA TAAAGTGCAT
CATCTGATGC GCCGTGACGA TGCCATCCCA CAGGTGGCGT TAACCGCCAG CGTGATGGAT
GCGATGCTGG AACTCAGCCG CACCGGTCTG GGGCTGGTGG CGGTATGTGA CGCTCAACAA
CAGGTACAAG GCGTCTTTAC CGACGGCGAT TTACGTCGCT GGCTGGTAGG CGGCGGGGCA
CTCACCACGC CAGTTAATGA AGCGATGACG ACAGGCGGCA CCACGTTACA GGCGCAAAGT
CGCGCCATCG ACGCCAAAGA GATCCTGATG AAGCGCAAAA TCACTGCCGC ACCGGTGGTG
GATGAAAACG GCAAACTCAC CGGCGCAATT AACCTGCAGG ATTTCTATCA GGCCGGGATT
ATTTAA
 
Protein sequence
MSEALLNAGR QTLMLELQEA SRLPERLGDD FVRAANIILH CEGKVVVSGI GKSGHIGKKI 
AATLASTGTP AFFVHPAEAL HGDLGMIESR DVMLFISYSG GAKELDLIIP RLEDKSIALL
AMTGKPTSPL GLAAKAVLDI SVEREACPMH LAPTSSTVNT LMMGDALAMA VMQARGFNEE
DFARSHPAGA LGARLLNKVH HLMRRDDAIP QVALTASVMD AMLELSRTGL GLVAVCDAQQ
QVQGVFTDGD LRRWLVGGGA LTTPVNEAMT TGGTTLQAQS RAIDAKEILM KRKITAAPVV
DENGKLTGAI NLQDFYQAGI I