Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0989 |
Symbol | |
ID | 6067766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1074821 |
End bp | 1076647 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641600397 |
Product | formate hydrogenlyase subunit 3 |
Protein accession | YP_001723985 |
Protein GI | 170019031 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.180245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAA TTTCCCTGAT CAATAGCGGC GTGGCGTGGT TTGTCGCCGC CGCTGTTCTG GCATTTCTCT TTTCTTTTCA AAAAGCGTTA AGTGGCTGGA TAGCTGGAAT TGGCGGCGCG GTTGGTAGTC TGTATACGGC AGCCGCGGGC TTCACTGTAC TGACTGGCGC GGTTGGCGTG AGCGGTGCGC TGTCGCTGGT AAGCTACGAT GTGCAAATCT CTCCGCTTAA CGCGATTTGG CTGATTACGC TCGGTCTGTG CGGTCTGTTT GTCAGCCTCT ACAACATTGA CTGGCATCGC CACGCGCAGG TGAAGTGCAA CGGCTTGCAG ATCAATATGT TGATGGCTGC CGCCGTCTGC GCCGTCATTG CCAGCAACCT CGGCATGTTC GTGGTAATGG CCGAAATCAT GGCCCTGTGC GCGGTGTTCC TCACCAGCAA CAGCAAAGAG GGCAAACTGT GGTTTGCGCT GGGGCGTCTT GGCACTCTGC TGCTGGCGAT TGCTTGCTGG CTGCTGTGGC AGCGTTACGG CACGCTGGAT CTGCGCCTGC TGGATATGCG TATGCAACAG CTGCCGCTCG GTTCCGATAT CTGGCTGCTC GGAGTGATTG GCTTTGGCCT GCTGGCCGGG ATTATTCCGC TGCACGGCTG GGTGCCGCAG GCACATGCGA ACGCCTCTGC GCCAGCTGCC GCGTTGTTTT CTACGGTAGT CATGAAAATT GGCCTGCTGG GCATTTTAAC CCTGTCACTG CTGGGCGGTA ATGCACCGCT GTGGTGGGGG ATCGCGCTGC TGGTGCTCGG CATGATCACC GCGTTTGTCG GTGGTCTGTA TGCGCTGATG GAGCACAACA TCCAGCGCCT GCTGGCTTAC CACACCCTGG AAAATATCGG CATCATCCTG CTGGGGCTGG GCGCTGGCGT AACGGGTATC GCGCTCGAAC AACCGGCGCT GATTGCTCTT GGCCTGGTCG GTGGTCTGTA CCATCTGCTT AACCATAGCC TGTTCAAAAG CGTACTGTTC CTCGGGGCGG GGAGCGTCTG GTTCCGTACC GGTCATCGCG ATATCGAAAA ACTCGGTGGT ATTGGCAAGA AAATGCCGGT TATCTCCATC GCCATGTTAG TCGGGCTGAT GGCAATGGCT GCGCTGCCGC CGCTGAATGG TTTTGCCGGG GAATGGGTTA TCTATCAATC ATTTTTCAAA CTGAGCAATA GTGGCGCGTT TGTTGCCCGT CTGCTGGGGC CGCTGCTCGC TGTGGGGCTG GCAATTACCG GTGCGCTGGC GGTGATGTGT ATGGCGAAAG TCTATGGCGT CACGTTCCTC GGCGCGCCGC GTACCAAAGA AGCCGAAAAC GCCACCTGTG CGCCGCTCCT GATGAGCGTA AGCGTAGTGG CACTGGCGAT TTGCTGCGTA ATTGGCGGTG TTGCTGCGCC GTGGCTACTG CCGATGCTCT CTGCTGCTGT ACCTCTGCCG CTGGAGCCTG CTAACACCAC CGTTTCTCAA CCGATGATCA CGTTGCTGCT GATTGCCTAC CCGCTGCTGC CATTCATCAT TATGGCGATT TGCAAAGGCG ATCGTTTGCC ATCGCGTTCC CGCGGTGCGG CCTGGGTGTG CGGTTACGAC CACGAAAAAT CAATGGTGAT TACCGCTCAC GGTTTTGCCA TGCCGGTGAA ACAGGCGTTT GCGCCGGTGC TGAAACTACG CAAATGGCTG AATCCGGTGT CTCTGGTGCC GGGCTGGCAG TGCGAGGGGA GTGCGTTGCT GTTCCGCCGG ATGGCGCTGG TTGAACTGGC GGTACTGGTG GTGATTATTG TTTCACGAGG AGCCTGA
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Protein sequence | MSAISLINSG VAWFVAAAVL AFLFSFQKAL SGWIAGIGGA VGSLYTAAAG FTVLTGAVGV SGALSLVSYD VQISPLNAIW LITLGLCGLF VSLYNIDWHR HAQVKCNGLQ INMLMAAAVC AVIASNLGMF VVMAEIMALC AVFLTSNSKE GKLWFALGRL GTLLLAIACW LLWQRYGTLD LRLLDMRMQQ LPLGSDIWLL GVIGFGLLAG IIPLHGWVPQ AHANASAPAA ALFSTVVMKI GLLGILTLSL LGGNAPLWWG IALLVLGMIT AFVGGLYALM EHNIQRLLAY HTLENIGIIL LGLGAGVTGI ALEQPALIAL GLVGGLYHLL NHSLFKSVLF LGAGSVWFRT GHRDIEKLGG IGKKMPVISI AMLVGLMAMA ALPPLNGFAG EWVIYQSFFK LSNSGAFVAR LLGPLLAVGL AITGALAVMC MAKVYGVTFL GAPRTKEAEN ATCAPLLMSV SVVALAICCV IGGVAAPWLL PMLSAAVPLP LEPANTTVSQ PMITLLLIAY PLLPFIIMAI CKGDRLPSRS RGAAWVCGYD HEKSMVITAH GFAMPVKQAF APVLKLRKWL NPVSLVPGWQ CEGSALLFRR MALVELAVLV VIIVSRGA
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