| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0986 |
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| Symbol | hypA |
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| ID | 6067788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 1073065 |
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| End bp | 1073415 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641600394 |
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| Product | hydrogenase nickel incorporation protein |
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| Protein accession | YP_001723982 |
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| Protein GI | 170019028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.209126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGAAA TAACCCTCTG CCAACGGGCA CTGGAATTGA TCGAACAGCA GGCCGCAAAA
CACGGCGCAA AACGCGTAAC TGGGGTCTGG CTCAAAATTG GCGCATTTTC TTGTGTCGAA
ACCAGCTCTC TTGCCTTTTG TTTTGATCTG GTTTGCCGCG GCAGCGTGGC GGAAGGTTGT
AAACTGCACC TCGAAGAACA AGAGGCCGAA TGCTGGTGTG AAACATGCCA ACAGTATGTG
ACGCTACTGA CCCAGCGCGT CCGCCGCTGT CCACAGTGTC ATGGTGACAT GCTGCAGATT
GTGGCAGACG ACGGTTTACA GATTCGGCGG ATAGAAATAG ACCAGGAGTG A
|
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| Protein sequence | MHEITLCQRA LELIEQQAAK HGAKRVTGVW LKIGAFSCVE TSSLAFCFDL VCRGSVAEGC
KLHLEEQEAE CWCETCQQYV TLLTQRVRRC PQCHGDMLQI VADDGLQIRR IEIDQE
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