| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0981 |
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| Symbol | |
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| ID | 6067810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 1067646 |
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| End bp | 1069724 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641600389 |
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| Product | NifA subfamily transcriptional regulator |
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| Protein accession | YP_001723977 |
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| Protein GI | 170019023 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.427916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATATA CACCGATGAG TGATCTCGGA CAACAAGGGT TGTTCGACAT CACTCGGACA
CTATTGCAGC AGCCCGATCT GGCCTCGCTG TGTGAGGCTC TTTCGCAACT GGTAAAGCGT
TCTGCGCTCG CCGACAACGC GGCTATTGTG TTGTGGCAAG CGCAGACTCA ACGTGCGTCT
TATTACGCGT CGCGTGAAAA AGACACCCCC ATTAAATATG AAGACGAAAC TGTTCTGGCA
CACGGTCCGG TACGCAGCAT TTTGTCGCGC CCTGATACGC TGCATTGCAG TTACGAAGAA
TTTTGTGAAA CCTGGCCGCA GCTGGACGCA GGTGGGCTAT ACCCAAAATT TGGTCACTAT
TGCCTGATGC CACTGGCGGC GGAAGGGCAT ATTTTTGGTG GCTGTGAATT TATTCGTTAT
GACGATCGCC CCTGGAGCGA AAAAGAGTTC AATCGTCTGC AAACATTTAC GCAGATCGTT
TCTGTCGTCA CCGAACAAAT CCAGAGCCGC GTCGTTAACA ATGTCGACTA TGAGTTGTTA
TGCCGGGAAC GCGATAACTT CCGCATCCTG GTCGCCATCA CCAACGCGGT GCTTTCCCGC
CTGGATATGG ACGAACTGGT CAGCGAAGTC GCCAAAGAAA TCCATTACTA TTTCGACATT
GACGATATCA GTATCGTCTT ACGCAGCCAC CGTAAAAACA AACTCAACAT CTACTCCACT
CACTATCTTG ATAAACAGCA TCCCGCCCAC GAACAGAGCG AAGTCGATGA AGCCGGAACC
CTCACCGAAC GCGTGTTCAA AAGTAAAGAG ATGCTGCTGA TCAATCTCCA CGAGCGGGAC
GATTTAGCCC CCTATGAACG CATGTTGTTC GACACCTGGG GCAACCAGAT TCAAACCTTG
TGCCTGTTAC CGCTGATGTC TGGCGACACC ATGCTGGGCG TGCTGAAACT GGCGCAATGC
GAAGAGAAAG TGTTTACCAC TACCAATCTG AATTTACTGC GCCAGATTGC CGAACGTGTG
GCAATCGCTG TCGATAACGC CCTCGCCTAT CAGGAAATCC ATCGTCTGAA AGAACGGCTG
GTTGATGAAA ACCTCGCCCT GACCGAGCAG CTCAACAATG TTGATAGTGA ATTTGGCGAG
ATTATTGGCC GCAGCGAAGC CATGTACAGC GTGCTTAAAC AAGTTGAAAT GGTGGCGCAA
AGTGACAGTA CCGTGCTGAT CCTCGGTGAA ACTGGCACGG GTAAAGAGCT GATTGCCCGT
GCGATCCATA ATCTCAGTGG GCGTAATAAT CGCCGCATGG TCAAAATGAA CTGCGCGGCG
ATGCCTGCCG GATTGCTGGA AAGCGATCTG TTTGGTCATG AGCGTGGGGC TTTTACCGGT
GCCAGCGCCC AGCGTATCGG TCGTTTTGAA CTGGCGGATA AAAGCTCCCT GTTCCTCGAC
GAAGTGGGCG ATATGCCACT GGAGTTACAG CCGAAGTTGC TGCGTGTATT GCAGGAACAG
GAGTTTGAAC GTCTCGGCAG CAACAAAATC ATTCAGACGG ACGTGCGTCT AATCGCCGCG
ACTAACCGCG ATCTGAAAAA AATGGTCGCC GACCGTGAGT TCCGTAGCGA TCTCTATTAC
CGCCTGAACG TATTCCCGAT TCACCTGCCG CCACTACGCG AGCGTCCGGA AGATATTCCG
CTGCTGGCGA AAGCCTTTAC CTTCAAAATT GCCCGTCGTC TGGGGCGCAA TATCGACAGC
ATTCCTGCCG AGACGCTGCG CACCTTGAGC AACATGGAGT GGCCGGGTAA CGTACGCGAA
CTGGAAAACG TCATTGAGCG CGCGGTATTG CTAACACGCG GTAACGTGCT GCAGCTGTCA
TTGCCAGATA TTGTTTTACC GGAACCTGAA ACGCCGCCTG CCGCAACGGT TGTCGCCCTG
GAGGGCGAAG ATGAATATCA GTTGATTGTG CGCGTGCTGA AAGAAACCAA CGGCGTGGTT
GCCGGGCCTA AAGGCGCTGC GCAACGTCTG GGGCTGAAAC GCACGACCCT GCTGTCACGG
ATGAAGCGGC TGGGAATTGA TAAATCGGCA TTGATTTAA
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| Protein sequence | MSYTPMSDLG QQGLFDITRT LLQQPDLASL CEALSQLVKR SALADNAAIV LWQAQTQRAS
YYASREKDTP IKYEDETVLA HGPVRSILSR PDTLHCSYEE FCETWPQLDA GGLYPKFGHY
CLMPLAAEGH IFGGCEFIRY DDRPWSEKEF NRLQTFTQIV SVVTEQIQSR VVNNVDYELL
CRERDNFRIL VAITNAVLSR LDMDELVSEV AKEIHYYFDI DDISIVLRSH RKNKLNIYST
HYLDKQHPAH EQSEVDEAGT LTERVFKSKE MLLINLHERD DLAPYERMLF DTWGNQIQTL
CLLPLMSGDT MLGVLKLAQC EEKVFTTTNL NLLRQIAERV AIAVDNALAY QEIHRLKERL
VDENLALTEQ LNNVDSEFGE IIGRSEAMYS VLKQVEMVAQ SDSTVLILGE TGTGKELIAR
AIHNLSGRNN RRMVKMNCAA MPAGLLESDL FGHERGAFTG ASAQRIGRFE LADKSSLFLD
EVGDMPLELQ PKLLRVLQEQ EFERLGSNKI IQTDVRLIAA TNRDLKKMVA DREFRSDLYY
RLNVFPIHLP PLRERPEDIP LLAKAFTFKI ARRLGRNIDS IPAETLRTLS NMEWPGNVRE
LENVIERAVL LTRGNVLQLS LPDIVLPEPE TPPAATVVAL EGEDEYQLIV RVLKETNGVV
AGPKGAAQRL GLKRTTLLSR MKRLGIDKSA LI
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