| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0970 |
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| Symbol | nlpD |
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| ID | 6068029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1055131 |
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| End bp | 1056270 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641600378 |
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| Product | lipoprotein NlpD |
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| Protein accession | YP_001723966 |
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| Protein GI | 170019012 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.957286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG GAAGCCCAAA ATTCACCGTT CGCCGCATTG CGGCTTTGTC ACTGGTTTCG
CTATGGCTGG CAGGCTGTTC TGACACTTCA AATCCACCGG CACCGGTCAG CTCCGTTAAT
GGCAATGCGC CTGCAAATAC TAATTCTGGT ATGTTGATTA CGCCGCCGCC GAAAATGGGG
ACGACGTCTA CAGCGCAGCA ACCGCAAATT CAGCCGGTAC AGCAGCCACA AATTCAGGCT
ACTCAACAAC CGCAAATCCA GCCAGTGCAG CCAGTAGCTC AGCAGCCGGT ACAGATGGAA
AACGGACGCA TCGTCTATAA CCGTCAGTAT GGGAACATTC CGAAAGGCAG TTATAGCGGC
AGTACCTATA CCGTGAAAAA AGGCGACACA CTTTTCTATA TCGCCTGGAT TACTGGCAAC
GATTTCCGTG ACCTTGCTCA GCGCAACAAT ATTCAGGCAC CATACGCGCT GAACGTTGGT
CAGACCTTGC AGGTGGGTAA TGCTTCCGGT ACGCCAATCA CTGGCGGAAA TGCCATTACC
CAGGCCGACG CAGCAGAGCA AGGAGTTGTG ATCAAGCCTG CACAAAATTC CACCGTTGCT
GTTGCGTCGC AACCGACAAT TACGTATTCT GAATCTTCGG GTGAACAGAG TGCTAACAAA
ATGTTGCCGA ACAACAAGCC AGCTGCGACC ACGGTCACAG CGCCTGTAAC GGTACCAACA
GCAAGCACAA CCGAGCCAAC TGTCAGCAGT ACATCAACCA GTACGCCTAT CTCCACCTGG
CGCTGGCCGA CTGAGGGCAA AGTGATCGAA ACCTTTGGCG CTTCTGAGGG GGGCAACAAG
GGGATTGATA TCGCAGGCAG CAAAGGACAG GCAATTATCG CGACCGCAGA TGGCCGCGTT
GTTTATGCTG GTAACGCGCT GCGCGGCTAC GGTAATCTGA TTATCATCAA ACATAATGAT
GATTACCTGA GTGCCTACGC CCATAACGAC ACAATGCTGG TCCGGGAACA ACAAGAAGTG
AAGGCGGGGC AAAAAATAGC AACCATGGGT AGCACCGGAA CCAGTTCAAC ACGCTTGCAT
TTTGAAATTC GTTACAAGGG GAAATCCGTA AACCCGCTGC GTTATTTGCC GCAGCGATAA
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| Protein sequence | MSAGSPKFTV RRIAALSLVS LWLAGCSDTS NPPAPVSSVN GNAPANTNSG MLITPPPKMG
TTSTAQQPQI QPVQQPQIQA TQQPQIQPVQ PVAQQPVQME NGRIVYNRQY GNIPKGSYSG
STYTVKKGDT LFYIAWITGN DFRDLAQRNN IQAPYALNVG QTLQVGNASG TPITGGNAIT
QADAAEQGVV IKPAQNSTVA VASQPTITYS ESSGEQSANK MLPNNKPAAT TVTAPVTVPT
ASTTEPTVSS TSTSTPISTW RWPTEGKVIE TFGASEGGNK GIDIAGSKGQ AIIATADGRV
VYAGNALRGY GNLIIIKHND DYLSAYAHND TMLVREQQEV KAGQKIATMG STGTSSTRLH
FEIRYKGKSV NPLRYLPQR
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