Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0957 |
Symbol | |
ID | 6068290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1043627 |
End bp | 1044544 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641600365 |
Product | CRISPR-associated Cas1 family protein |
Protein accession | YP_001723953 |
Protein GI | 170018999 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGC TTCCTCTTAA CCCCATTCCA CTCAAAGATC GCGTCTCCAT GATCTTTCTG CAATATGGGC AGATCGATGT AATCGATGGC GCGTTTGTAC TTATCGACAA GACAGGGATC CGCACTCATA TTCCTGTTGG CTCGGTTGCC TGCATCATGC TGGAGCCTGG TACACGGGTT TCGCATGCAG CTGTACGCTT GGCTGCGCAA GTTGGAACAT TATTGGTATG GGTGGGGGAA GCGGGTGTTC GTGTTTATGC TTCTGGTCAG CCTGGTGGTG CGCGTTCAGA TAAGCTGCTC TATCAGGCAA AACTTGCTCT GGATGAAGAT TTGCGTCTGA AAGTGGTACG CAAAATGTTT GAACTACGGT TTGGCGAACC AGCGCCCGCC CGACGCTCCG TAGAACAACT CCGAGGTATA GAAGGCAGTC GCGTGCGGGC AACCTACGCA CTTCTGGCGA AGCAATACGG CGTGACATGG AATGGACGTC GCTACGATCC GAAAGACTGG GAAAAGGGCG ATACGGTCAA CCAATGCATT AGCGCTGCAA CTTCCTGTTT ATACGGCGTA ACTGAAGCGG CGATACTTGC AGCTGGTTAT GCACCCGCTA TTGGGTTTGT GCATACAGGA AAGCCTCTTT CCTTTGTTTA CGATATTGCA GACATCATTA AATTTGACAC TGTTGTACCG AAAGCTTTTG AGATAGCGCG TCGTAACCCT GGTGAGCCGG ACCGGGAAGT CCGTTTGGCG TGCAGGGATA TTTTTCGCAG TAGTAAAACA TTAGCCAAAT TGATTCCGCT TATAGAGGAC GTGCTTGCTG CTGGAGAAAT ACAACCGCCG GCCCCACCTG AAGATGCACA GCCTGTTGCC ATTCCGCTTC CCGTTTCTCT GGGAGATGCC GGACATCGGA GTAGCTGA
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Protein sequence | MTWLPLNPIP LKDRVSMIFL QYGQIDVIDG AFVLIDKTGI RTHIPVGSVA CIMLEPGTRV SHAAVRLAAQ VGTLLVWVGE AGVRVYASGQ PGGARSDKLL YQAKLALDED LRLKVVRKMF ELRFGEPAPA RRSVEQLRGI EGSRVRATYA LLAKQYGVTW NGRRYDPKDW EKGDTVNQCI SAATSCLYGV TEAAILAAGY APAIGFVHTG KPLSFVYDIA DIIKFDTVVP KAFEIARRNP GEPDREVRLA CRDIFRSSKT LAKLIPLIED VLAAGEIQPP APPEDAQPVA IPLPVSLGDA GHRSS
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