Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0951 |
Symbol | |
ID | 6068341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1036180 |
End bp | 1038846 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641600359 |
Product | hypothetical protein |
Protein accession | YP_001723947 |
Protein GI | 170018993 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCTT TTAAATATAT ATGCCATTAC TGGGGAAAAT CCTCAAAAAG CTTGACGAAA GGAAATGATA TTCATCTGTT AATTTATCAT TGCCTTGATG TTGCTGCTGT TGCAGATTGC TGGTGGGATC AATCAGTCGT ACTGCAAAAT ACTTTTTGCC GAAATGAAAT GCTATCAAAA CAGAGGGTGA AGGCCTGGCT GTTATTTTTC ATTGCTCTTC ATGATATTGG AAAGTTTGAT ATACGATTCC AATATAAATC AGCAGAAAGT TGGCTGAAAT TAAATCCTGC AACGCCATCA CTTAATGGTC CATCAACACA AATGTGCCGT AAATTTAATC ATGGTGCAGC CGGTCTGTAT TGGTTTAACC AGGATTCACT TTCAGAGCAA TCTCTCGGGG ATTTTTTCAG TTTTTTTGAT GCCGCTCCTC ATCCTTATGA GTCCTGGTTT CCATGGGTAG AGGCCGTTAC AGGACATCAT GGTTTTATAT TACATTCCCA GGATCAAGAT AAGTCGCGTT GGGAAATGCC AGCTTCTCTG GCATCTTATG CTGCGCAAGA TAAACAGGCT CGTGAGGAGT GGATATCTGT ACTGGAAGCA TTATTTTTAA CGCCAGCGGG GTTATCTATA AACGATATAC CACCTGATTG TTCATCACTG TTAGCAGGTT TTTGCTCGCT TGCTGACTGG TTAGGCTCCT GGACTACAAC GAATACCTTT CTGTTTAATG AGGATGCGCC TTCCGACATA AATGCTCTGA GAACGTATTT CCAGGACCGA CAGCAGGATG CGAGCCGGGT ATTGGAGTTG AGTGGACTTG TATCAAATAA GCGATGTTAT GAAGGTGTTC ATGCACTACT GGACAATGGC TATCAACCCA GACAATTACA GGTGTTAGTT GATGCTCTTC CAGTAGCTCC CGGGCTGACG GTAATAGAGG CACCTACAGG CTCCGGTAAA ACGGAAACAG CGCTGGCCTA TGCTTGGAAA CTTATTGATC AACAAATTGC GGATAGTGTT ATTTTTGCCC TCCCAACACA AGCTACCGCG AATGCTATGC TTACGAGAAT GGAAGCGAGC GCGAGCCACT TATTTTCATC CCCAAATCTT ATTCTTGCTC ATGGCAATTC ACGGTTTAAC CACCTCTTTC AATCAATAAA ATCACGCGCG ATTACTGAAC AGGGGCAAGA AGAAGCGTGG GTTCAGTGTT GTCAGTGGTT GTCACAAAGC AATAAGAAAG TGTTTCTTGG GCAAATCGGC GTTTGCACGA TTGATCAGGT GTTGATATCG GTATTGCCAG TTAAACACCG CTTTATCCGT GGTTTGGGAA TTGGTCGAAG TGTTTTAATT GTTGATGAAG TTCATGCTTA CGACACCTAT ATGAACGGCT TGCTGGAGGC AGTGCTCAAG GCTCAGGCTG ATGTGGGAGG GAGTGTTATT CTTCTTTCCG CAACCCTACC AATGAAACAA AAACAGAAAC TTCTGGATAC TTATGGTCTG CATACAGATC CAGTGGAAAA TAACTCCGCA TATCCACTCA TTAACTGGCG AGGTGTGAAT GGTGCGCAAC GTTTTGATCT GCTAGCTCAT CCAGAACAAC TCCCGCCCCG CTTTTCGATT CAGCCAGAAC CTATTTATTT AGCTGACATG TTACCTGACC TTACGATGTT AGAGCGAATG ATCGCAGCGG CAAACGCGGG TGCACAAGTC TGTCTTATTT GCAATTTGGT TGACGTTGCA CAAGTATGCT ACCAACGGCT AAAGGAGCTA AATAACACGC AAGTAGATAT AGATTTGTTT CATGCACGCT TTACGCTGAA CGATCGTCGA GAAAAAGAGA ATCGTGTTAT TAGCGATTTC GGAAAAAATG GGGAGCGAAA TGTTGGACGA ATACTTGTCG CCACGCAAGT CGTGGAACAA TCGCTCGACG TTGATTTTGA TTGGTTAATT ACCCAGCATT GTCCCGCAGA TTTGCTTTTC CAACGATTGG GTCGTTTACA TCGCCATCAT CGCAAATATC GTCCCGCTGG TTTTGAGATT CCTGTTGCCA CCATTTTGCT GCCTGATGGC GAGGGTTACG GACGACATGA GCATATTTAT AGCAACGTTA GAGTTATGTG GCGGACGCAG CAACATATTG AGGAACTTAA TGGAGCATCC TTATTTTTCC CTGATGCCTA CCGGCAATGG CTGGATAGCA TTTACGATGA TGCTGAAATG GATGAGCCAG AATGGGTCAT CAAAGGCATG GATAAGTTTG AAAGCGCTGA GTGTGAAAAG AGGTTCAAGG CTCGCAAGGT TCTGCAGTGG GCTGAAGAAT ATAGTTTGCA GGATAACGAT GAAACCATTC TTGCGGTAAC GAGGGATGGG GAAATGAGCC TGCCATTATT GCCTTATGTA CAAACGTCTT CAGGTAAACA ACTGCTCGAT GGCCAGGTCT ACGAGGACCT AAGTTATGAA CAGCAGTATG AGGCGCTTGC ACTTAATCGC GTCAATGTAC CCTTCACCTG GAAACGTAGT TTTTCTGAAG TAGTAGATGA AGATGGGTTA CTTTGGCTGG AAGGGAAACA GAATCAGGAT GGATGGTTCT GGCAGGGTAA CAGTATTGTT ATTACCTACA CTCGGGATGA AGGGATGACC AGAGTCATCC CTGCAAATCC CAAATAA
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Protein sequence | MEPFKYICHY WGKSSKSLTK GNDIHLLIYH CLDVAAVADC WWDQSVVLQN TFCRNEMLSK QRVKAWLLFF IALHDIGKFD IRFQYKSAES WLKLNPATPS LNGPSTQMCR KFNHGAAGLY WFNQDSLSEQ SLGDFFSFFD AAPHPYESWF PWVEAVTGHH GFILHSQDQD KSRWEMPASL ASYAAQDKQA REEWISVLEA LFLTPAGLSI NDIPPDCSSL LAGFCSLADW LGSWTTTNTF LFNEDAPSDI NALRTYFQDR QQDASRVLEL SGLVSNKRCY EGVHALLDNG YQPRQLQVLV DALPVAPGLT VIEAPTGSGK TETALAYAWK LIDQQIADSV IFALPTQATA NAMLTRMEAS ASHLFSSPNL ILAHGNSRFN HLFQSIKSRA ITEQGQEEAW VQCCQWLSQS NKKVFLGQIG VCTIDQVLIS VLPVKHRFIR GLGIGRSVLI VDEVHAYDTY MNGLLEAVLK AQADVGGSVI LLSATLPMKQ KQKLLDTYGL HTDPVENNSA YPLINWRGVN GAQRFDLLAH PEQLPPRFSI QPEPIYLADM LPDLTMLERM IAAANAGAQV CLICNLVDVA QVCYQRLKEL NNTQVDIDLF HARFTLNDRR EKENRVISDF GKNGERNVGR ILVATQVVEQ SLDVDFDWLI TQHCPADLLF QRLGRLHRHH RKYRPAGFEI PVATILLPDG EGYGRHEHIY SNVRVMWRTQ QHIEELNGAS LFFPDAYRQW LDSIYDDAEM DEPEWVIKGM DKFESAECEK RFKARKVLQW AEEYSLQDND ETILAVTRDG EMSLPLLPYV QTSSGKQLLD GQVYEDLSYE QQYEALALNR VNVPFTWKRS FSEVVDEDGL LWLEGKQNQD GWFWQGNSIV ITYTRDEGMT RVIPANPK
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