Gene EcolC_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0916 
Symbol 
ID6068615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp991187 
End bp992476 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content52% 
IMG OID641600323 
Productserine transporter 
Protein accessionYP_001723912 
Protein GI170018958 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA CTCAAACCAG CACGATTGCG TCGAAAGACT CTCGTAGTGC CTGGCGCAAG 
ACAGACACCA TGTGGATGCT GGGCCTTTAC GGCACGGCAA TCGGCGCGGG CGTGCTGTTC
CTGCCAATCA ACGCCGGTGT TGGCGGTATG ATCCCGCTGA TCATCATGGC TATCCTTGCG
TTCCCGATGA CGTTTTTTGC TCACCGCGGC CTGACTCGCT TCGTACTGTC TGGTAAAAAC
CCGGGCGAAG ACATCACCGA GGTTGTAGAA GAACACTTTG GTATTGGCGC AGGTAAACTG
ATTACCCTGC TCTATTTCTT CGCTATCTAC CCGATCCTGC TGGTTTATAG CGTAGCAATC
ACCAATACAG TTGAAAGCTT CATGTCTCAC CAGCTGGGTA TGACACCACC GCCGCGTGCG
ATTCTGTCGC TGATCCTGAT CGTGGGTATG ATGACCATCG TTCGCTTCGG TGAGCAGATG
ATCGTTAAAG CGATGAGTAT TCTGGTATTC CCGTTTGTTG GCGTACTGAT GCTGCTGGCT
CTGTACCTGA TCCCGCAGTG GAACGGCGCA GCACTGGAAA CGCTGTCTCT GGACACTGCA
TCTGCAACCG GGAACGGTCT GTGGATGACC CTGTGGCAGG CAATTCCGGT AATGGTGTTC
TCGTTCAACC ACTCTCCGAT CATCTCTTCT TTCGCCGTTG CGAAGCGTGA AGAGTACGGC
GATATGGCAG AACAGAAATG CTCGAAGATC CTTGCATTCG CACACATCAT GATGGTGCTG
ACCGTAATGT TCTTCGTCTT CAGCTGCGTA CTGAGCCTGA CTCCGGCAGA CCTGGCTGCG
GCTAAAGAGC AGAACATCTC GATTCTGTCT TACCTGGCTA ACCACTTTAA CGCACCGGTT
ATCGCGTGGA TGGCTCCGAT TATCGCGATT ATCGCTATCA CCAAATCCTT CCTCGGCCAC
TACCTGGGCG CACGTGAAGG CTTCAACGGT ATGGTGATTA AATCTCTGCG TGGTAAAGGT
AAGTCTATCG AAATCAACAA GCTGAACCGT ATCACTGCGC TGTTCATGCT GGTAACGACC
TGGATTGTTG CCACCCTGAA CCCGAGCATC CTGGGTATGA TTGAAACCCT GGGCGGCCCA
ATCATCGCGA TGATCCTGTT CCTGATGCCG ATGTACGCAA TTCAGAAAGT ACCGGCAATG
CGTAAGTACA GCGGTCACAT CAGCAACGTA TTCGTTGTCG TGATGGGTCT GATTGCAATC
TCCGCAATCT TCTACTCTCT GTTCAGCTAA
 
Protein sequence
METTQTSTIA SKDSRSAWRK TDTMWMLGLY GTAIGAGVLF LPINAGVGGM IPLIIMAILA 
FPMTFFAHRG LTRFVLSGKN PGEDITEVVE EHFGIGAGKL ITLLYFFAIY PILLVYSVAI
TNTVESFMSH QLGMTPPPRA ILSLILIVGM MTIVRFGEQM IVKAMSILVF PFVGVLMLLA
LYLIPQWNGA ALETLSLDTA SATGNGLWMT LWQAIPVMVF SFNHSPIISS FAVAKREEYG
DMAEQKCSKI LAFAHIMMVL TVMFFVFSCV LSLTPADLAA AKEQNISILS YLANHFNAPV
IAWMAPIIAI IAITKSFLGH YLGAREGFNG MVIKSLRGKG KSIEINKLNR ITALFMLVTT
WIVATLNPSI LGMIETLGGP IIAMILFLMP MYAIQKVPAM RKYSGHISNV FVVVMGLIAI
SAIFYSLFS